Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06675

Experiment: Formate with hypochlorite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate with hypochlorite 5 mM
1,280,541	+		MMP_RS06670	0.51	-1.0
1,280,612	-		MMP_RS06670	0.57	+0.9
1,280,612	-		MMP_RS06670	0.57	-0.8
1,280,784	-		MMP_RS06670	0.70	+0.7
1,280,828	+		MMP_RS06670	0.73	+0.6
1,280,837	-		MMP_RS06670	0.74	-0.0
1,280,837	-		MMP_RS06670	0.74	-0.8
1,280,838	+		MMP_RS06670	0.74	-2.0
1,280,838	+		MMP_RS06670	0.74	-0.2
1,281,148	+				-0.3
1,281,150	+				+0.4
1,281,151	-				+0.5
1,281,152	+				+1.0
1,281,162	-				+0.7
1,281,169	-				+0.5
1,281,170	+				+0.6
1,281,170	+				+0.4
1,281,218	-				+0.1
1,281,219	+				+0.4
1,281,257	+				-0.1
1,281,261	-				-0.5
1,281,261	-				-0.0
1,281,261	-				+0.5
1,281,262	+				+0.5
1,281,319	-				+1.1
1,281,496	+		MMP_RS06675	0.21	-0.4
1,281,496	+		MMP_RS06675	0.21	-0.2
1,281,949	-		MMP_RS06675	0.53	+0.4
1,282,241	-		MMP_RS06675	0.74	+0.2
1,282,242	+		MMP_RS06675	0.74	+0.2
1,282,256	+		MMP_RS06675	0.75	-0.1
1,282,256	+		MMP_RS06675	0.75	+0.3
1,282,261	+		MMP_RS06675	0.76	+0.5
1,282,261	+		MMP_RS06675	0.76	+0.4
1,282,261	+		MMP_RS06675	0.76	+0.2
1,282,337	-		MMP_RS06675	0.81	+0.5
1,282,396	-		MMP_RS06675	0.85	+0.4
1,282,403	-		MMP_RS06675	0.86	+0.6
1,282,407	+		MMP_RS06675	0.86	+0.1
1,282,424	+		MMP_RS06675	0.87	+0.6
1,282,535	-				+0.5
1,282,558	-				-0.2
1,282,563	-				+0.1
1,282,600	-				+0.0
1,282,747	-		MMP_RS06680	0.11	-3.5
1,282,754	-		MMP_RS06680	0.11	-3.0
1,282,754	-		MMP_RS06680	0.11	-2.8
1,282,867	-		MMP_RS06680	0.21	-3.1
1,282,901	-		MMP_RS06680	0.24	-4.6
1,282,901	-		MMP_RS06680	0.24	-3.2
1,282,901	-		MMP_RS06680	0.24	-3.2
1,282,901	-		MMP_RS06680	0.24	-4.0
1,282,902	+		MMP_RS06680	0.24	-3.2
1,282,928	+		MMP_RS06680	0.26	-3.5
1,283,339	-		MMP_RS06680	0.62	-3.6
1,283,364	-		MMP_RS06680	0.64	-3.4
1,283,432	+		MMP_RS06680	0.70	-3.4
1,283,432	+		MMP_RS06680	0.70	-2.9
1,283,432	+		MMP_RS06680	0.70	-2.9
1,283,433	-		MMP_RS06680	0.70	-3.3
1,283,435	-		MMP_RS06680	0.70	-3.0
1,283,435	-		MMP_RS06680	0.70	-3.0
1,283,435	-		MMP_RS06680	0.70	-3.4
1,283,435	-		MMP_RS06680	0.70	-3.3
1,283,436	+		MMP_RS06680	0.70	-4.2
1,283,436	+		MMP_RS06680	0.70	-2.3
1,283,528	-		MMP_RS06680	0.78	-2.7