Experiment: Formate with hypochlorite 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS06240 and MMP_RS06245 are separated by 38 nucleotides MMP_RS06245 and MMP_RS06250 are separated by 41 nucleotides MMP_RS06250 and MMP_RS06255 are separated by 98 nucleotides
MMP_RS06240: MMP_RS06240 - thiolase domain-containing protein, at 1,199,123 to 1,200,301
_RS06240
MMP_RS06245: MMP_RS06245 - Zn-ribbon domain-containing OB-fold protein, at 1,200,340 to 1,200,732
_RS06245
MMP_RS06250: MMP_RS06250 - hypothetical protein, at 1,200,774 to 1,201,451
_RS06250
MMP_RS06255: MMP_RS06255 - cobyric acid synthase CobQ, at 1,201,550 to 1,203,028
_RS06255
Position (kb)
1200
1201
1202 Strain fitness (log2 ratio)
-2
-1
0
1 at 1199.888 kb on + strand at 1200.236 kb on + strand at 1200.312 kb on + strand at 1200.766 kb on + strand at 1200.776 kb on + strand at 1200.780 kb on + strand at 1200.826 kb on - strand at 1200.857 kb on + strand, within MMP_RS06250 at 1200.917 kb on - strand, within MMP_RS06250 at 1201.002 kb on - strand, within MMP_RS06250 at 1201.150 kb on + strand, within MMP_RS06250 at 1201.279 kb on + strand, within MMP_RS06250 at 1201.329 kb on + strand, within MMP_RS06250 at 1201.333 kb on - strand, within MMP_RS06250 at 1201.333 kb on - strand, within MMP_RS06250 at 1201.334 kb on + strand, within MMP_RS06250 at 1201.340 kb on - strand, within MMP_RS06250 at 1201.415 kb on + strand at 1201.418 kb on + strand at 1201.477 kb on - strand at 1201.478 kb on + strand at 1201.514 kb on - strand at 1201.546 kb on - strand at 1201.546 kb on - strand at 1201.559 kb on + strand at 1201.589 kb on - strand at 1201.632 kb on - strand at 1201.683 kb on + strand at 1201.895 kb on - strand at 1202.383 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Formate with hypochlorite 5 mM remove 1,199,888 + -2.2 1,200,236 + -1.2 1,200,312 + -2.3 1,200,766 + +0.8 1,200,776 + -0.6 1,200,780 + +0.5 1,200,826 - -0.7 1,200,857 + MMP_RS06250 0.12 +0.6 1,200,917 - MMP_RS06250 0.21 -0.1 1,201,002 - MMP_RS06250 0.34 -0.4 1,201,150 + MMP_RS06250 0.55 -0.3 1,201,279 + MMP_RS06250 0.74 -0.1 1,201,329 + MMP_RS06250 0.82 +0.2 1,201,333 - MMP_RS06250 0.82 +0.8 1,201,333 - MMP_RS06250 0.82 +0.1 1,201,334 + MMP_RS06250 0.83 +0.3 1,201,340 - MMP_RS06250 0.83 +1.0 1,201,415 + -1.3 1,201,418 + +0.6 1,201,477 - -0.1 1,201,478 + +0.3 1,201,514 - +0.7 1,201,546 - -0.4 1,201,546 - +0.6 1,201,559 + +0.3 1,201,589 - -2.7 1,201,632 - -1.8 1,201,683 + -0.7 1,201,895 - -1.2 1,202,383 - -0.8
Or see this region's nucleotide sequence