Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06170

Experiment: Formate with hypochlorite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate with hypochlorite 5 mM
1,183,688	-				-0.1
1,183,719	-				+0.5
1,183,719	-				+0.4
1,183,768	+				-0.2
1,183,768	+				-0.0
1,183,801	-				-0.4
1,183,826	-				-0.1
1,183,860	+				-0.9
1,183,894	+				-1.2
1,183,898	-				-0.7
1,184,080	+		MMP_RS06165	0.27	-1.2
1,184,223	+		MMP_RS06165	0.46	-0.7
1,184,245	+		MMP_RS06165	0.49	-0.4
1,184,247	-		MMP_RS06165	0.49	-0.1
1,184,248	+		MMP_RS06165	0.49	-0.8
1,184,283	-		MMP_RS06165	0.54	-2.3
1,184,284	+		MMP_RS06165	0.54	-0.4
1,184,316	-		MMP_RS06165	0.58	-1.8
1,184,376	+		MMP_RS06165	0.66	-1.2
1,184,500	-		MMP_RS06165	0.82	-1.0
1,184,500	-		MMP_RS06165	0.82	-0.6
1,184,501	+		MMP_RS06165	0.82	-0.1
1,184,501	+		MMP_RS06165	0.82	-0.8
1,184,546	-		MMP_RS06165	0.88	-0.8
1,184,551	+		MMP_RS06165	0.89	-0.8
1,184,590	-				-1.0
1,184,590	-				-2.2
1,184,591	+				-1.1
1,184,593	+				+0.3
1,184,605	-				-2.9
1,184,632	-				-0.7
1,184,632	-				-1.6
1,184,783	-		MMP_RS06170	0.14	-1.6
1,185,068	+		MMP_RS06170	0.51	-1.8
1,185,195	+		MMP_RS06170	0.68	-1.1
1,185,275	+		MMP_RS06170	0.78	-1.5
1,185,330	-		MMP_RS06170	0.85	-3.3
1,185,338	-		MMP_RS06170	0.86	-1.1
1,185,339	+		MMP_RS06170	0.87	-0.9
1,185,339	+		MMP_RS06170	0.87	-2.9
1,185,339	+		MMP_RS06170	0.87	-0.1
1,185,339	+		MMP_RS06170	0.87	-1.7
1,185,339	+		MMP_RS06170	0.87	-2.2
1,185,433	-				-0.8
1,185,454	+				-0.0
1,185,460	+				+0.1
1,185,469	-				-3.0
1,185,470	+				-1.7
1,185,470	+				-1.6
1,185,476	+				-2.4
1,185,501	+				-2.0
1,185,585	-				-2.8
1,185,746	+		MMP_RS06175	0.24	-2.5
1,185,822	+		MMP_RS06175	0.33	-3.7
1,185,857	-		MMP_RS06175	0.37	-2.0
1,185,858	+		MMP_RS06175	0.37	-1.5
1,185,876	-		MMP_RS06175	0.39	-3.0
1,185,889	-		MMP_RS06175	0.40	-2.3
1,185,918	+		MMP_RS06175	0.44	-3.1
1,186,206	-		MMP_RS06175	0.77	-1.4
1,186,305	-		MMP_RS06175	0.89	-2.9
1,186,379	+				+0.1
1,186,401	+				+0.5