Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06055

Experiment: Formate with hypochlorite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate with hypochlorite 5 mM
1,155,961	-				-0.4
1,155,997	+				+0.1
1,156,001	+				+0.0
1,156,001	+				-0.1
1,156,001	+				+0.6
1,156,001	+				+1.0
1,156,042	-		MMP_RS06050	0.14	-0.2
1,156,043	+		MMP_RS06050	0.14	+0.3
1,156,075	+		MMP_RS06050	0.18	-0.3
1,156,137	-		MMP_RS06050	0.25	-0.9
1,156,347	-		MMP_RS06050	0.51	+0.4
1,156,348	+		MMP_RS06050	0.51	-0.6
1,156,350	-		MMP_RS06050	0.52	+0.6
1,156,421	+		MMP_RS06050	0.60	+0.2
1,156,455	-		MMP_RS06050	0.65	-0.1
1,156,651	-		MMP_RS06050	0.89	-0.5
1,156,652	+		MMP_RS06050	0.89	+0.3
1,156,781	-				-0.5
1,156,815	-				+0.9
1,156,816	+				+0.4
1,156,820	+				-0.2
1,156,820	+				-0.8
1,156,902	-				-0.0
1,156,902	-				+0.4
1,156,903	+				-0.2
1,156,904	-				-0.5
1,156,904	-				-0.5
1,156,905	+				+0.2
1,156,905	+				-0.3
1,156,905	+				-1.2
1,156,905	+				+0.2
1,156,906	-				+0.4
1,156,906	-				-0.5
1,156,927	-				-0.1
1,156,929	-				-0.0
1,156,930	+				-0.0
1,156,934	+				-0.2
1,156,934	+				+0.0
1,156,964	-				+0.7
1,157,035	-		MMP_RS06055	0.11	-0.2
1,157,035	-		MMP_RS06055	0.11	-0.6
1,157,038	+		MMP_RS06055	0.12	+0.0
1,157,064	+		MMP_RS06055	0.16	-0.0
1,157,213	-		MMP_RS06055	0.39	+0.1
1,157,238	+		MMP_RS06055	0.43	-0.0
1,157,337	+		MMP_RS06055	0.58	+0.8
1,157,397	-		MMP_RS06055	0.67	+0.5
1,157,603	-				-0.7
1,157,702	-				+0.5
1,157,703	+				-0.3
1,157,706	-				+0.4
1,157,771	+				-0.7
1,157,837	+				+0.2
1,158,077	-		MMP_RS06060	0.30	-0.9
1,158,118	+		MMP_RS06060	0.34	-0.2
1,158,123	-		MMP_RS06060	0.34	+0.9
1,158,124	+		MMP_RS06060	0.34	+0.4
1,158,198	+		MMP_RS06060	0.41	+0.6
1,158,255	-		MMP_RS06060	0.46	+1.0
1,158,255	-		MMP_RS06060	0.46	+0.0
1,158,256	+		MMP_RS06060	0.46	+0.5
1,158,438	-		MMP_RS06060	0.63	-0.1
1,158,503	+		MMP_RS06060	0.69	-0.1
1,158,534	-		MMP_RS06060	0.72	+0.2
1,158,543	+		MMP_RS06060	0.73	+0.2
1,158,544	-		MMP_RS06060	0.73	-0.2
1,158,570	+		MMP_RS06060	0.75	-0.1