Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05470

Experiment: Formate with hypochlorite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate with hypochlorite 5 mM
1,047,901	+		MMP_RS05465	0.13	+0.9
1,047,961	+		MMP_RS05465	0.19	-1.2
1,047,964	+		MMP_RS05465	0.19	+0.2
1,047,994	-		MMP_RS05465	0.22	+0.0
1,047,994	-		MMP_RS05465	0.22	-0.4
1,048,000	+		MMP_RS05465	0.22	+0.3
1,048,000	+		MMP_RS05465	0.22	-0.2
1,048,000	+		MMP_RS05465	0.22	+0.4
1,048,000	+		MMP_RS05465	0.22	+0.2
1,048,001	-		MMP_RS05465	0.22	-0.4
1,048,001	-		MMP_RS05465	0.22	+0.8
1,048,002	+		MMP_RS05465	0.23	-0.3
1,048,008	-		MMP_RS05465	0.23	+0.0
1,048,012	+		MMP_RS05465	0.23	-0.9
1,048,013	-		MMP_RS05465	0.24	-0.5
1,048,013	-		MMP_RS05465	0.24	-0.3
1,048,023	-		MMP_RS05465	0.24	+0.1
1,048,084	-		MMP_RS05465	0.30	+0.8
1,048,084	-		MMP_RS05465	0.30	-0.1
1,048,084	-		MMP_RS05465	0.30	-0.4
1,048,084	-		MMP_RS05465	0.30	-0.2
1,048,084	-		MMP_RS05465	0.30	-0.0
1,048,084	-		MMP_RS05465	0.30	-0.2
1,048,084	-		MMP_RS05465	0.30	+0.3
1,048,085	+		MMP_RS05465	0.30	+0.5
1,048,085	+		MMP_RS05465	0.30	-0.3
1,048,085	+		MMP_RS05465	0.30	-0.6
1,048,085	+		MMP_RS05465	0.30	-0.8
1,048,086	-		MMP_RS05465	0.30	+0.7
1,048,086	-		MMP_RS05465	0.30	+0.4
1,048,086	-		MMP_RS05465	0.30	+0.2
1,048,087	+		MMP_RS05465	0.31	+0.4
1,048,087	+		MMP_RS05465	0.31	+0.6
1,048,124	+		MMP_RS05465	0.34	+0.2
1,048,125	-		MMP_RS05465	0.34	-1.4
1,048,125	-		MMP_RS05465	0.34	+0.3
1,048,125	-		MMP_RS05465	0.34	-0.6
1,048,125	-		MMP_RS05465	0.34	+0.1
1,048,125	-		MMP_RS05465	0.34	+0.4
1,048,126	+		MMP_RS05465	0.34	+0.3
1,048,126	+		MMP_RS05465	0.34	-0.3
1,048,126	+		MMP_RS05465	0.34	+0.7
1,048,149	-		MMP_RS05465	0.36	+0.3
1,048,149	-		MMP_RS05465	0.36	-0.1
1,048,150	+		MMP_RS05465	0.36	+0.8
1,048,150	+		MMP_RS05465	0.36	+0.0
1,048,162	-		MMP_RS05465	0.38	+0.1
1,048,166	+		MMP_RS05465	0.38	+0.0
1,048,171	+		MMP_RS05465	0.38	+0.0
1,048,226	-		MMP_RS05465	0.44	+0.3
1,048,226	-		MMP_RS05465	0.44	+0.1
1,048,227	+		MMP_RS05465	0.44	+0.3
1,048,227	+		MMP_RS05465	0.44	-0.9
1,048,227	+		MMP_RS05465	0.44	-0.2
1,048,246	-		MMP_RS05465	0.45	-0.5
1,048,246	-		MMP_RS05465	0.45	-1.4
1,048,247	+		MMP_RS05465	0.46	+0.4
1,048,259	+		MMP_RS05465	0.47	-0.0
1,048,259	+		MMP_RS05465	0.47	+0.0
1,048,261	-		MMP_RS05465	0.47	-0.2
1,048,262	+		MMP_RS05465	0.47	-0.4
1,048,262	+		MMP_RS05465	0.47	+0.2
1,048,262	+		MMP_RS05465	0.47	+0.2
1,048,264	+		MMP_RS05465	0.47	-0.4
1,048,300	+		MMP_RS05465	0.51	+0.0
1,048,353	-		MMP_RS05465	0.56	-0.3
1,048,353	-		MMP_RS05465	0.56	+0.0
1,048,354	+		MMP_RS05465	0.56	+0.3
1,048,420	+		MMP_RS05465	0.62	-1.1
1,048,438	-		MMP_RS05465	0.64	-0.2
1,048,528	-		MMP_RS05465	0.72	-0.0
1,048,600	+		MMP_RS05465	0.79	+0.3
1,048,616	+		MMP_RS05465	0.80	-0.1
1,048,713	+		MMP_RS05465	0.89	-1.3
1,048,803	-				+0.0
1,048,829	-				+0.1
1,048,829	-				+0.4
1,048,829	-				-0.0
1,048,829	-				-0.0
1,048,829	-				+0.3
1,048,830	+				+1.2
1,048,838	-				+0.1
1,048,839	+				-0.4
1,048,839	+				+0.0
1,048,843	-				+0.2
1,048,847	-				+0.6
1,048,847	-				+0.5
1,048,848	+				+0.2
1,048,852	+				-0.0
1,048,853	-				+0.2
1,049,049	-		MMP_RS05470	0.15	+0.0
1,049,123	+		MMP_RS05470	0.23	+0.3
1,049,135	-		MMP_RS05470	0.24	+0.3
1,049,206	+		MMP_RS05470	0.31	-0.1
1,049,233	+		MMP_RS05470	0.34	+0.0
1,049,250	+		MMP_RS05470	0.36	-0.1
1,049,368	+		MMP_RS05470	0.48	+0.1
1,049,391	-		MMP_RS05470	0.51	+0.5
1,049,391	-		MMP_RS05470	0.51	+0.1
1,049,396	+		MMP_RS05470	0.51	+0.8
1,049,396	+		MMP_RS05470	0.51	+0.1
1,049,534	+		MMP_RS05470	0.65	+0.3
1,049,583	-		MMP_RS05470	0.70	-0.8
1,049,647	-		MMP_RS05470	0.77	+0.3
1,049,647	-		MMP_RS05470	0.77	+0.4
1,049,647	-		MMP_RS05470	0.77	+0.5
1,049,648	+		MMP_RS05470	0.77	+1.0
1,049,648	+		MMP_RS05470	0.77	-0.6
1,049,683	+		MMP_RS05470	0.81	+0.6
1,049,683	+		MMP_RS05470	0.81	+0.2
1,049,799	+				-0.0
1,049,996	-				-0.6
1,050,010	-				+0.7
1,050,010	-				-0.0
1,050,016	+				+0.6
1,050,060	+				+0.3
1,050,129	-				-0.1
1,050,290	+		MMP_RS05480	0.13	+0.2
1,050,314	-		MMP_RS05480	0.15	-0.0
1,050,538	+		MMP_RS05480	0.31	+0.3
1,050,612	+		MMP_RS05480	0.36	+0.1
1,050,656	-		MMP_RS05480	0.39	+0.4
1,050,660	-		MMP_RS05480	0.39	+0.3
1,050,694	-		MMP_RS05480	0.41	+0.2
1,050,698	-		MMP_RS05480	0.42	+0.9
1,050,761	-		MMP_RS05480	0.46	+0.4
1,050,762	+		MMP_RS05480	0.46	+0.1
1,050,863	-		MMP_RS05480	0.53	+0.4
1,050,863	-		MMP_RS05480	0.53	+0.2
1,050,863	-		MMP_RS05480	0.53	+0.2
1,050,864	+		MMP_RS05480	0.53	-0.5
1,050,864	+		MMP_RS05480	0.53	+0.5
1,050,864	+		MMP_RS05480	0.53	+0.2
1,050,864	+		MMP_RS05480	0.53	+0.2
1,050,864	+		MMP_RS05480	0.53	+0.2
1,050,865	-		MMP_RS05480	0.53	+0.8
1,050,865	-		MMP_RS05480	0.53	+0.5
1,050,865	-		MMP_RS05480	0.53	-0.0
1,050,866	+		MMP_RS05480	0.53	-0.2
1,050,866	+		MMP_RS05480	0.53	-0.0
1,050,866	+		MMP_RS05480	0.53	+0.3
1,050,867	-		MMP_RS05480	0.53	-0.0
1,050,868	+		MMP_RS05480	0.53	+0.7