Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05435

Experiment: Formate with hypochlorite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate with hypochlorite 5 mM
1,041,728	-		MMP_RS05425	0.35	-0.1
1,041,728	-		MMP_RS05425	0.35	-0.2
1,041,728	-		MMP_RS05425	0.35	-0.8
1,041,728	-		MMP_RS05425	0.35	-3.8
1,041,728	-		MMP_RS05425	0.35	+0.3
1,041,729	+		MMP_RS05425	0.35	-0.3
1,041,810	+		MMP_RS05425	0.65	+0.4
1,041,833	-		MMP_RS05425	0.74	-0.1
1,041,834	+		MMP_RS05425	0.74	-1.8
1,041,834	+		MMP_RS05425	0.74	-0.3
1,041,916	+				+0.1
1,041,920	+				-0.1
1,041,981	+				+0.1
1,042,004	-		MMP_RS05430	0.10	-0.4
1,042,004	-		MMP_RS05430	0.10	+0.2
1,042,076	-		MMP_RS05430	0.21	-0.1
1,042,169	-		MMP_RS05430	0.35	-0.5
1,042,170	+		MMP_RS05430	0.36	-2.9
1,042,196	-		MMP_RS05430	0.40	-2.0
1,042,271	-		MMP_RS05430	0.51	-1.1
1,042,475	-		MMP_RS05430	0.83	-2.5
1,042,508	-		MMP_RS05430	0.88	-2.0
1,042,513	+		MMP_RS05430	0.89	-1.1
1,042,513	+		MMP_RS05430	0.89	-1.4
1,042,603	-				-1.4
1,042,631	+				-2.3
1,042,639	-				-1.2
1,042,640	+				-1.2
1,042,726	+				+1.6
1,042,768	-		MMP_RS05435	0.13	-1.4
1,042,768	-		MMP_RS05435	0.13	+0.3
1,042,769	+		MMP_RS05435	0.13	+0.5
1,042,820	-		MMP_RS05435	0.20	+0.2
1,042,940	+		MMP_RS05435	0.35	-0.0
1,043,165	+		MMP_RS05435	0.63	+0.8
1,043,209	-		MMP_RS05435	0.69	+0.5
1,043,233	+		MMP_RS05435	0.72	+0.4
1,043,311	-		MMP_RS05435	0.82	+0.7
1,043,325	-		MMP_RS05435	0.83	+0.3
1,043,383	-				+0.2
1,043,383	-				-0.4
1,043,384	+				-0.2
1,043,480	+				+0.4
1,043,502	+				+0.2
1,043,502	+				+0.5
1,043,503	-				+0.4
1,043,504	+				+0.2
1,043,504	+				-0.2
1,043,504	+				+0.0
1,043,508	-				-0.3
1,043,512	-				-0.1
1,043,539	+				+0.2
1,043,554	+				+0.2
1,043,558	-				+0.2
1,043,581	+				+0.0
1,043,589	-				+0.2
1,043,592	+				+0.5
1,043,592	+				-0.0
1,043,598	+				+0.2
1,043,628	-				-0.1
1,043,643	+				+0.1
1,043,643	+				+0.3
1,043,646	-				+0.2
1,043,646	-				+0.3
1,043,647	+				-0.7
1,043,650	-				+0.0
1,043,651	+				-0.1
1,043,661	+				+0.4
1,043,708	-				+0.2
1,043,727	+				-0.3
1,043,727	+				+0.1
1,043,730	-				-0.5
1,043,730	-				-0.6
1,043,730	-				-0.6
1,043,730	-				-0.1
1,043,730	-				-0.7
1,043,731	+				-0.3
1,043,731	+				+0.1
1,043,731	+				-0.7
1,043,731	+				+0.8
1,043,733	+				+0.2
1,043,745	-				-0.2
1,043,745	-				+0.2
1,043,746	+				-0.4
1,043,748	+				+0.5
1,043,808	-				-0.9
1,043,809	+				-1.0
1,043,853	-				-0.8
1,043,854	+				-0.5
1,043,857	+				-1.0
1,043,888	-		MMP_RS05440	0.12	-0.7
1,043,888	-		MMP_RS05440	0.12	-1.1
1,043,966	+		MMP_RS05440	0.22	-0.5
1,044,121	-		MMP_RS05440	0.42	-1.4
1,044,121	-		MMP_RS05440	0.42	-0.9
1,044,122	+		MMP_RS05440	0.42	-0.2
1,044,142	-		MMP_RS05440	0.44	-0.9
1,044,142	-		MMP_RS05440	0.44	-0.7
1,044,143	+		MMP_RS05440	0.44	-1.1
1,044,143	+		MMP_RS05440	0.44	-1.1
1,044,143	+		MMP_RS05440	0.44	-1.1
1,044,143	+		MMP_RS05440	0.44	-0.9
1,044,324	+		MMP_RS05440	0.67	-1.3