Experiment: Formate with hypochlorite 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS04480 and MMP_RS04485 are separated by 0 nucleotides MMP_RS04485 and MMP_RS04490 are separated by 149 nucleotides MMP_RS04490 and MMP_RS04495 are separated by 8 nucleotides
MMP_RS04480: MMP_RS04480 - lysine 2 3-aminomutase, at 852,237 to 853,538
_RS04480
MMP_RS04485: MMP_RS04485 - putative beta-lysine N-acetyltransferase, at 853,539 to 854,363
_RS04485
MMP_RS04490: MMP_RS04490 - CBS domain-containing protein, at 854,513 to 854,989
_RS04490
MMP_RS04495: MMP_RS04495 - cation:proton antiporter, at 854,998 to 856,164
_RS04495
Position (kb) 854
855 Strain fitness (log2 ratio) -1
0
1 at 853.580 kb on + strand at 853.600 kb on - strand at 853.601 kb on + strand at 853.601 kb on + strand at 853.601 kb on + strand at 853.602 kb on - strand at 853.602 kb on - strand at 853.603 kb on + strand at 853.604 kb on - strand at 853.605 kb on + strand at 853.735 kb on + strand, within MMP_RS04485 at 853.782 kb on - strand, within MMP_RS04485 at 853.783 kb on + strand, within MMP_RS04485 at 853.787 kb on - strand, within MMP_RS04485 at 853.788 kb on + strand, within MMP_RS04485 at 853.788 kb on + strand, within MMP_RS04485 at 853.945 kb on - strand, within MMP_RS04485 at 853.945 kb on - strand, within MMP_RS04485 at 854.007 kb on + strand, within MMP_RS04485 at 854.007 kb on + strand, within MMP_RS04485 at 854.008 kb on - strand, within MMP_RS04485 at 854.009 kb on + strand, within MMP_RS04485 at 854.011 kb on - strand, within MMP_RS04485 at 854.032 kb on - strand, within MMP_RS04485 at 854.097 kb on + strand, within MMP_RS04485 at 854.097 kb on + strand, within MMP_RS04485 at 854.167 kb on + strand, within MMP_RS04485 at 854.175 kb on - strand, within MMP_RS04485 at 854.177 kb on - strand, within MMP_RS04485 at 854.178 kb on + strand, within MMP_RS04485 at 854.178 kb on + strand, within MMP_RS04485 at 854.178 kb on + strand, within MMP_RS04485 at 854.178 kb on + strand, within MMP_RS04485 at 854.178 kb on + strand, within MMP_RS04485 at 854.279 kb on - strand, within MMP_RS04485 at 854.303 kb on - strand at 854.306 kb on - strand at 854.306 kb on - strand at 854.346 kb on - strand at 854.425 kb on + strand at 854.428 kb on - strand at 854.428 kb on - strand at 854.428 kb on - strand at 854.428 kb on - strand at 854.429 kb on + strand at 854.429 kb on + strand at 854.429 kb on + strand at 854.429 kb on + strand at 854.429 kb on + strand at 854.429 kb on + strand at 854.430 kb on - strand at 854.431 kb on + strand at 854.431 kb on + strand at 854.481 kb on - strand at 854.486 kb on - strand at 854.492 kb on + strand at 854.492 kb on + strand at 854.619 kb on - strand, within MMP_RS04490 at 854.638 kb on - strand, within MMP_RS04490 at 854.638 kb on - strand, within MMP_RS04490 at 854.638 kb on - strand, within MMP_RS04490 at 854.638 kb on - strand, within MMP_RS04490 at 854.638 kb on - strand, within MMP_RS04490 at 854.639 kb on + strand, within MMP_RS04490 at 854.665 kb on + strand, within MMP_RS04490 at 854.698 kb on + strand, within MMP_RS04490 at 854.706 kb on + strand, within MMP_RS04490 at 854.756 kb on + strand, within MMP_RS04490 at 854.768 kb on + strand, within MMP_RS04490 at 854.837 kb on + strand, within MMP_RS04490 at 854.841 kb on - strand, within MMP_RS04490 at 854.849 kb on + strand, within MMP_RS04490 at 854.862 kb on - strand, within MMP_RS04490 at 854.862 kb on - strand, within MMP_RS04490 at 854.888 kb on - strand, within MMP_RS04490 at 854.926 kb on - strand, within MMP_RS04490 at 854.926 kb on - strand, within MMP_RS04490 at 854.927 kb on + strand, within MMP_RS04490 at 854.931 kb on - strand, within MMP_RS04490 at 854.965 kb on - strand at 854.965 kb on - strand at 854.966 kb on + strand at 855.040 kb on + strand at 855.041 kb on - strand at 855.066 kb on + strand at 855.230 kb on - strand, within MMP_RS04495 at 855.262 kb on + strand, within MMP_RS04495 at 855.540 kb on + strand, within MMP_RS04495 at 855.548 kb on - strand, within MMP_RS04495 at 855.586 kb on - strand, within MMP_RS04495 at 855.825 kb on + strand, within MMP_RS04495 at 855.835 kb on - strand, within MMP_RS04495 at 855.857 kb on - strand, within MMP_RS04495 at 855.857 kb on - strand, within MMP_RS04495 at 855.887 kb on - strand, within MMP_RS04495 at 855.888 kb on + strand, within MMP_RS04495 at 855.888 kb on + strand, within MMP_RS04495 at 855.888 kb on + strand, within MMP_RS04495 at 855.911 kb on - strand, within MMP_RS04495
Per-strain Table
Position Strand Gene LocusTag Fraction Formate with hypochlorite 5 mM remove 853,580 + -0.3 853,600 - -1.1 853,601 + -0.6 853,601 + -0.4 853,601 + +0.1 853,602 - -0.1 853,602 - -0.2 853,603 + -1.1 853,604 - -0.8 853,605 + -0.4 853,735 + MMP_RS04485 0.24 -0.5 853,782 - MMP_RS04485 0.29 -0.4 853,783 + MMP_RS04485 0.30 -0.4 853,787 - MMP_RS04485 0.30 -1.0 853,788 + MMP_RS04485 0.30 +0.4 853,788 + MMP_RS04485 0.30 -0.5 853,945 - MMP_RS04485 0.49 -0.7 853,945 - MMP_RS04485 0.49 -0.8 854,007 + MMP_RS04485 0.57 -1.4 854,007 + MMP_RS04485 0.57 -0.7 854,008 - MMP_RS04485 0.57 -0.6 854,009 + MMP_RS04485 0.57 -0.2 854,011 - MMP_RS04485 0.57 -0.9 854,032 - MMP_RS04485 0.60 -0.4 854,097 + MMP_RS04485 0.68 -0.4 854,097 + MMP_RS04485 0.68 -1.4 854,167 + MMP_RS04485 0.76 -0.2 854,175 - MMP_RS04485 0.77 -1.1 854,177 - MMP_RS04485 0.77 -0.8 854,178 + MMP_RS04485 0.77 -1.5 854,178 + MMP_RS04485 0.77 -0.7 854,178 + MMP_RS04485 0.77 -1.1 854,178 + MMP_RS04485 0.77 -0.4 854,178 + MMP_RS04485 0.77 -0.4 854,279 - MMP_RS04485 0.90 -1.0 854,303 - -1.5 854,306 - -0.6 854,306 - -0.8 854,346 - -0.5 854,425 + +0.4 854,428 - +0.2 854,428 - +0.2 854,428 - -0.2 854,428 - +0.3 854,429 + -0.4 854,429 + +0.5 854,429 + -0.0 854,429 + +0.4 854,429 + -0.2 854,429 + -0.6 854,430 - +0.3 854,431 + -0.2 854,431 + +0.1 854,481 - -0.1 854,486 - -1.4 854,492 + +0.6 854,492 + -0.8 854,619 - MMP_RS04490 0.22 -0.4 854,638 - MMP_RS04490 0.26 -0.1 854,638 - MMP_RS04490 0.26 +0.1 854,638 - MMP_RS04490 0.26 -0.4 854,638 - MMP_RS04490 0.26 -0.5 854,638 - MMP_RS04490 0.26 -1.0 854,639 + MMP_RS04490 0.26 +0.2 854,665 + MMP_RS04490 0.32 -0.1 854,698 + MMP_RS04490 0.39 +0.1 854,706 + MMP_RS04490 0.40 -0.2 854,756 + MMP_RS04490 0.51 +0.2 854,768 + MMP_RS04490 0.53 -0.3 854,837 + MMP_RS04490 0.68 -0.5 854,841 - MMP_RS04490 0.69 +0.6 854,849 + MMP_RS04490 0.70 -0.2 854,862 - MMP_RS04490 0.73 +0.6 854,862 - MMP_RS04490 0.73 -0.4 854,888 - MMP_RS04490 0.79 +0.4 854,926 - MMP_RS04490 0.87 -0.1 854,926 - MMP_RS04490 0.87 +0.1 854,927 + MMP_RS04490 0.87 -0.2 854,931 - MMP_RS04490 0.88 +0.3 854,965 - -0.0 854,965 - -0.0 854,966 + +0.5 855,040 + +0.4 855,041 - -0.5 855,066 + -0.6 855,230 - MMP_RS04495 0.20 -0.6 855,262 + MMP_RS04495 0.23 +0.3 855,540 + MMP_RS04495 0.46 +0.2 855,548 - MMP_RS04495 0.47 +0.2 855,586 - MMP_RS04495 0.50 -0.1 855,825 + MMP_RS04495 0.71 -0.4 855,835 - MMP_RS04495 0.72 +0.7 855,857 - MMP_RS04495 0.74 -0.0 855,857 - MMP_RS04495 0.74 +0.5 855,887 - MMP_RS04495 0.76 +0.2 855,888 + MMP_RS04495 0.76 -0.5 855,888 + MMP_RS04495 0.76 -1.7 855,888 + MMP_RS04495 0.76 +0.3 855,911 - MMP_RS04495 0.78 -0.3
Or see this region's nucleotide sequence