Experiment: Formate with hypochlorite 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS03860 and MMP_RS03865 are separated by 937 nucleotides MMP_RS03865 and MMP_RS08965 are separated by 93 nucleotides MMP_RS08965 and MMP_RS03870 are separated by 20 nucleotides
MMP_RS03860: MMP_RS03860 - hypothetical protein, at 730,287 to 731,216
_RS03860
MMP_RS03865: MMP_RS03865 - aspartate/glutamate racemase family protein, at 732,154 to 732,858
_RS03865
MMP_RS08965: MMP_RS08965 - hypothetical protein, at 732,952 to 733,107
_RS08965
MMP_RS03870: MMP_RS03870 - purine NTPase, at 733,128 to 733,808
_RS03870
Position (kb) 732
733 Strain fitness (log2 ratio) -1
0
1 at 731.268 kb on - strand at 731.268 kb on - strand at 731.270 kb on - strand at 731.271 kb on + strand at 731.271 kb on + strand at 731.272 kb on - strand at 731.272 kb on - strand at 731.272 kb on - strand at 731.272 kb on - strand at 731.273 kb on + strand at 731.273 kb on + strand at 731.273 kb on + strand at 731.275 kb on - strand at 731.275 kb on - strand at 731.275 kb on - strand at 731.275 kb on - strand at 731.276 kb on + strand at 731.276 kb on + strand at 731.276 kb on + strand at 731.276 kb on + strand at 731.276 kb on + strand at 731.280 kb on + strand at 731.282 kb on - strand at 731.283 kb on + strand at 731.416 kb on - strand at 731.416 kb on - strand at 731.431 kb on - strand at 731.432 kb on + strand at 731.432 kb on + strand at 731.456 kb on + strand at 731.456 kb on + strand at 731.459 kb on + strand at 731.459 kb on + strand at 731.471 kb on - strand at 731.472 kb on + strand at 731.472 kb on + strand at 731.490 kb on + strand at 731.493 kb on - strand at 731.519 kb on - strand at 731.520 kb on + strand at 731.546 kb on - strand at 731.608 kb on - strand at 731.621 kb on - strand at 731.626 kb on + strand at 731.700 kb on + strand at 731.727 kb on - strand at 731.841 kb on - strand at 732.063 kb on - strand at 732.231 kb on - strand, within MMP_RS03865 at 732.232 kb on + strand, within MMP_RS03865 at 732.232 kb on + strand, within MMP_RS03865 at 732.249 kb on - strand, within MMP_RS03865 at 732.249 kb on - strand, within MMP_RS03865 at 732.281 kb on + strand, within MMP_RS03865 at 732.310 kb on + strand, within MMP_RS03865 at 732.310 kb on + strand, within MMP_RS03865 at 732.310 kb on + strand, within MMP_RS03865 at 732.373 kb on + strand, within MMP_RS03865 at 732.419 kb on + strand, within MMP_RS03865 at 732.419 kb on + strand, within MMP_RS03865 at 732.422 kb on + strand, within MMP_RS03865 at 732.491 kb on + strand, within MMP_RS03865 at 732.568 kb on - strand, within MMP_RS03865 at 732.570 kb on - strand, within MMP_RS03865 at 732.571 kb on + strand, within MMP_RS03865 at 732.616 kb on - strand, within MMP_RS03865 at 732.744 kb on - strand, within MMP_RS03865 at 732.775 kb on + strand, within MMP_RS03865 at 732.807 kb on + strand at 732.872 kb on - strand at 732.873 kb on + strand at 732.873 kb on + strand at 732.875 kb on - strand at 732.886 kb on + strand at 732.907 kb on + strand at 732.930 kb on + strand at 733.100 kb on + strand at 733.125 kb on - strand at 733.152 kb on - strand at 733.218 kb on - strand, within MMP_RS03870 at 733.547 kb on - strand, within MMP_RS03870 at 733.550 kb on + strand, within MMP_RS03870 at 733.566 kb on - strand, within MMP_RS03870 at 733.571 kb on - strand, within MMP_RS03870 at 733.622 kb on + strand, within MMP_RS03870 at 733.855 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Formate with hypochlorite 5 mM remove 731,268 - +0.4 731,268 - +0.6 731,270 - +0.6 731,271 + +0.8 731,271 + +0.2 731,272 - +0.3 731,272 - +0.6 731,272 - -0.1 731,272 - +0.3 731,273 + +0.3 731,273 + -0.2 731,273 + +0.1 731,275 - +0.3 731,275 - +0.1 731,275 - +0.6 731,275 - +0.0 731,276 + +0.2 731,276 + +0.4 731,276 + -0.3 731,276 + -0.1 731,276 + -0.2 731,280 + +0.1 731,282 - +0.5 731,283 + +0.0 731,416 - -0.1 731,416 - -0.2 731,431 - -1.3 731,432 + -0.2 731,432 + -1.3 731,456 + +0.3 731,456 + +0.2 731,459 + +0.0 731,459 + -0.3 731,471 - +0.3 731,472 + +0.5 731,472 + +0.1 731,490 + +0.3 731,493 - +0.3 731,519 - -0.4 731,520 + +0.1 731,546 - -0.3 731,608 - +0.2 731,621 - +0.5 731,626 + -0.2 731,700 + -0.6 731,727 - +0.3 731,841 - +0.1 732,063 - +0.3 732,231 - MMP_RS03865 0.11 +0.1 732,232 + MMP_RS03865 0.11 -0.1 732,232 + MMP_RS03865 0.11 +0.5 732,249 - MMP_RS03865 0.13 +0.8 732,249 - MMP_RS03865 0.13 -0.0 732,281 + MMP_RS03865 0.18 +0.1 732,310 + MMP_RS03865 0.22 +0.6 732,310 + MMP_RS03865 0.22 -0.3 732,310 + MMP_RS03865 0.22 +0.8 732,373 + MMP_RS03865 0.31 +0.4 732,419 + MMP_RS03865 0.38 -0.2 732,419 + MMP_RS03865 0.38 +0.2 732,422 + MMP_RS03865 0.38 +0.3 732,491 + MMP_RS03865 0.48 +0.4 732,568 - MMP_RS03865 0.59 +0.4 732,570 - MMP_RS03865 0.59 +0.1 732,571 + MMP_RS03865 0.59 +0.4 732,616 - MMP_RS03865 0.66 -0.5 732,744 - MMP_RS03865 0.84 +0.1 732,775 + MMP_RS03865 0.88 +0.1 732,807 + -0.3 732,872 - -0.1 732,873 + -0.3 732,873 + +0.2 732,875 - -0.2 732,886 + +0.2 732,907 + +0.1 732,930 + +0.6 733,100 + -0.6 733,125 - +0.3 733,152 - +0.0 733,218 - MMP_RS03870 0.13 +0.4 733,547 - MMP_RS03870 0.62 +0.4 733,550 + MMP_RS03870 0.62 +0.3 733,566 - MMP_RS03870 0.64 -0.5 733,571 - MMP_RS03870 0.65 +0.0 733,622 + MMP_RS03870 0.73 -1.3 733,855 + -0.1
Or see this region's nucleotide sequence