Experiment: Formate with hypochlorite 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS01115 and MMP_RS01120 are separated by 789 nucleotides MMP_RS01120 and MMP_RS01125 are separated by 42 nucleotides MMP_RS01125 and MMP_RS01130 are separated by 69 nucleotides
MMP_RS01115: MMP_RS01115 - molybdopterin molybdotransferase MoeA, at 208,252 to 209,379
_RS01115
MMP_RS01120: MMP_RS01120 - permease, at 210,169 to 211,125
_RS01120
MMP_RS01125: MMP_RS01125 - thioredoxin family protein, at 211,168 to 211,401
_RS01125
MMP_RS01130: MMP_RS01130 - flavoprotein, at 211,471 to 212,001
_RS01130
Position (kb) 210
211
212 Strain fitness (log2 ratio) -1
0
1 at 209.293 kb on + strand at 209.377 kb on - strand at 209.380 kb on - strand at 209.384 kb on + strand at 209.386 kb on - strand at 209.388 kb on - strand at 209.388 kb on - strand at 209.388 kb on - strand at 209.388 kb on - strand at 209.389 kb on + strand at 209.393 kb on + strand at 209.393 kb on + strand at 209.393 kb on + strand at 209.519 kb on - strand at 209.549 kb on - strand at 209.549 kb on - strand at 209.550 kb on + strand at 209.555 kb on - strand at 209.560 kb on + strand at 209.573 kb on - strand at 209.643 kb on - strand at 209.644 kb on + strand at 209.645 kb on - strand at 209.645 kb on - strand at 209.646 kb on + strand at 209.646 kb on + strand at 209.646 kb on + strand at 209.656 kb on - strand at 209.656 kb on - strand at 209.658 kb on - strand at 209.659 kb on + strand at 209.670 kb on - strand at 209.678 kb on - strand at 209.678 kb on - strand at 209.688 kb on + strand at 209.689 kb on - strand at 209.689 kb on - strand at 209.689 kb on - strand at 209.690 kb on + strand at 209.691 kb on - strand at 209.691 kb on - strand at 209.691 kb on - strand at 209.692 kb on + strand at 209.692 kb on + strand at 209.705 kb on + strand at 209.746 kb on + strand at 209.773 kb on - strand at 209.776 kb on - strand at 209.791 kb on + strand at 209.801 kb on - strand at 209.820 kb on + strand at 209.840 kb on - strand at 209.841 kb on + strand at 209.947 kb on - strand at 209.947 kb on - strand at 209.955 kb on - strand at 209.959 kb on - strand at 209.959 kb on - strand at 209.959 kb on - strand at 210.003 kb on + strand at 210.010 kb on - strand at 210.010 kb on - strand at 210.010 kb on - strand at 210.010 kb on - strand at 210.011 kb on + strand at 210.012 kb on - strand at 210.012 kb on - strand at 210.012 kb on - strand at 210.013 kb on + strand at 210.013 kb on + strand at 210.013 kb on + strand at 210.013 kb on + strand at 210.013 kb on + strand at 210.014 kb on - strand at 210.055 kb on - strand at 210.055 kb on - strand at 210.055 kb on - strand at 210.055 kb on - strand at 210.057 kb on - strand at 210.057 kb on - strand at 210.062 kb on - strand at 210.062 kb on - strand at 210.066 kb on - strand at 210.066 kb on - strand at 210.066 kb on - strand at 210.067 kb on + strand at 210.067 kb on + strand at 210.123 kb on - strand at 210.188 kb on + strand at 210.201 kb on - strand at 210.202 kb on + strand at 210.290 kb on - strand, within MMP_RS01120 at 210.309 kb on + strand, within MMP_RS01120 at 210.309 kb on + strand, within MMP_RS01120 at 210.309 kb on + strand, within MMP_RS01120 at 210.322 kb on - strand, within MMP_RS01120 at 210.327 kb on - strand, within MMP_RS01120 at 210.328 kb on + strand, within MMP_RS01120 at 210.334 kb on - strand, within MMP_RS01120 at 210.407 kb on - strand, within MMP_RS01120 at 210.624 kb on - strand, within MMP_RS01120 at 210.664 kb on - strand, within MMP_RS01120 at 210.669 kb on + strand, within MMP_RS01120 at 211.030 kb on + strand at 211.184 kb on - strand at 211.217 kb on + strand, within MMP_RS01125 at 211.253 kb on - strand, within MMP_RS01125 at 211.254 kb on + strand, within MMP_RS01125 at 211.300 kb on - strand, within MMP_RS01125 at 211.300 kb on - strand, within MMP_RS01125 at 211.300 kb on - strand, within MMP_RS01125 at 211.301 kb on + strand, within MMP_RS01125 at 211.301 kb on + strand, within MMP_RS01125 at 211.305 kb on + strand, within MMP_RS01125 at 211.325 kb on - strand, within MMP_RS01125 at 211.416 kb on + strand at 211.429 kb on - strand at 211.429 kb on - strand at 211.455 kb on - strand at 211.455 kb on - strand at 211.456 kb on + strand at 211.456 kb on + strand at 211.457 kb on - strand at 211.457 kb on - strand at 211.458 kb on + strand at 211.458 kb on + strand at 211.458 kb on + strand at 211.458 kb on + strand at 211.496 kb on - strand at 211.497 kb on + strand at 211.500 kb on - strand at 211.678 kb on - strand, within MMP_RS01130 at 211.678 kb on - strand, within MMP_RS01130 at 211.746 kb on - strand, within MMP_RS01130 at 211.747 kb on + strand, within MMP_RS01130 at 211.770 kb on - strand, within MMP_RS01130 at 211.773 kb on + strand, within MMP_RS01130 at 211.806 kb on - strand, within MMP_RS01130 at 211.807 kb on + strand, within MMP_RS01130 at 211.880 kb on - strand, within MMP_RS01130 at 212.008 kb on - strand at 212.008 kb on - strand at 212.009 kb on + strand at 212.012 kb on - strand at 212.013 kb on + strand at 212.017 kb on + strand at 212.018 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Formate with hypochlorite 5 mM remove 209,293 + +0.4 209,377 - -0.1 209,380 - -0.5 209,384 + +0.2 209,386 - +0.1 209,388 - -0.4 209,388 - -0.9 209,388 - +0.4 209,388 - +0.6 209,389 + -0.2 209,393 + -0.4 209,393 + +0.7 209,393 + +0.2 209,519 - +0.5 209,549 - -0.1 209,549 - +0.4 209,550 + -0.3 209,555 - +0.1 209,560 + +0.1 209,573 - +1.0 209,643 - +0.1 209,644 + -0.1 209,645 - -0.2 209,645 - -0.4 209,646 + -1.4 209,646 + +0.2 209,646 + +0.9 209,656 - -0.9 209,656 - +0.2 209,658 - -0.3 209,659 + +0.4 209,670 - -0.3 209,678 - +0.4 209,678 - +0.6 209,688 + +0.5 209,689 - -0.3 209,689 - +0.4 209,689 - -0.1 209,690 + +0.4 209,691 - +0.0 209,691 - +0.1 209,691 - +0.6 209,692 + +0.1 209,692 + +0.4 209,705 + +0.6 209,746 + +0.4 209,773 - -0.0 209,776 - -0.3 209,791 + +0.3 209,801 - +0.3 209,820 + +1.2 209,840 - +0.4 209,841 + +0.5 209,947 - +0.5 209,947 - +0.1 209,955 - -0.4 209,959 - +0.5 209,959 - -0.4 209,959 - +0.2 210,003 + -0.3 210,010 - -0.2 210,010 - +0.6 210,010 - +0.5 210,010 - +0.5 210,011 + +0.1 210,012 - -0.1 210,012 - +1.0 210,012 - +0.8 210,013 + +0.6 210,013 + +0.8 210,013 + +0.4 210,013 + +0.7 210,013 + +0.4 210,014 - -0.1 210,055 - -0.0 210,055 - +0.3 210,055 - -0.3 210,055 - -0.4 210,057 - +0.3 210,057 - +0.7 210,062 - +0.7 210,062 - +0.1 210,066 - -0.1 210,066 - -0.1 210,066 - +0.1 210,067 + +0.2 210,067 + -1.0 210,123 - +0.1 210,188 + +0.1 210,201 - +0.4 210,202 + +0.6 210,290 - MMP_RS01120 0.13 +0.2 210,309 + MMP_RS01120 0.15 +0.5 210,309 + MMP_RS01120 0.15 +0.5 210,309 + MMP_RS01120 0.15 +0.2 210,322 - MMP_RS01120 0.16 +0.3 210,327 - MMP_RS01120 0.17 +0.3 210,328 + MMP_RS01120 0.17 +0.1 210,334 - MMP_RS01120 0.17 -0.0 210,407 - MMP_RS01120 0.25 +0.6 210,624 - MMP_RS01120 0.48 +0.3 210,664 - MMP_RS01120 0.52 +0.2 210,669 + MMP_RS01120 0.52 +0.4 211,030 + +0.1 211,184 - +0.2 211,217 + MMP_RS01125 0.21 -1.0 211,253 - MMP_RS01125 0.36 -0.8 211,254 + MMP_RS01125 0.37 -0.8 211,300 - MMP_RS01125 0.56 -0.2 211,300 - MMP_RS01125 0.56 +0.8 211,300 - MMP_RS01125 0.56 +0.1 211,301 + MMP_RS01125 0.57 +0.1 211,301 + MMP_RS01125 0.57 +0.6 211,305 + MMP_RS01125 0.59 -1.4 211,325 - MMP_RS01125 0.67 +0.1 211,416 + +0.5 211,429 - -0.3 211,429 - -0.3 211,455 - +0.3 211,455 - -0.1 211,456 + +0.5 211,456 + +0.8 211,457 - -0.1 211,457 - -1.1 211,458 + -0.1 211,458 + -0.2 211,458 + -0.4 211,458 + +0.1 211,496 - +0.6 211,497 + +0.1 211,500 - -0.5 211,678 - MMP_RS01130 0.39 -0.2 211,678 - MMP_RS01130 0.39 +0.5 211,746 - MMP_RS01130 0.52 -0.0 211,747 + MMP_RS01130 0.52 -0.2 211,770 - MMP_RS01130 0.56 -0.1 211,773 + MMP_RS01130 0.57 +0.2 211,806 - MMP_RS01130 0.63 +0.3 211,807 + MMP_RS01130 0.63 +0.2 211,880 - MMP_RS01130 0.77 +0.6 212,008 - +0.9 212,008 - +0.3 212,009 + +0.2 212,012 - -0.0 212,013 + +1.4 212,017 + +0.4 212,018 - -0.1
Or see this region's nucleotide sequence