Experiment: Formate with hypochlorite 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS01045 and MMP_RS01050 are separated by 84 nucleotides MMP_RS01050 and MMP_RS01055 are separated by 334 nucleotides MMP_RS01055 and MMP_RS01060 are separated by 236 nucleotides
MMP_RS01045: MMP_RS01045 - diphthamide biosynthesis enzyme Dph2, at 196,599 to 197,528
_RS01045
MMP_RS01050: MMP_RS01050 - tRNA-Leu, at 197,613 to 197,697
_RS01050
MMP_RS01055: MMP_RS01055 - hypothetical protein, at 198,032 to 198,409
_RS01055
MMP_RS01060: MMP_RS01060 - calcium/sodium antiporter, at 198,646 to 199,608
_RS01060
Position (kb) 198
199 Strain fitness (log2 ratio) -1
0
1 at 197.096 kb on - strand, within MMP_RS01045 at 197.209 kb on - strand, within MMP_RS01045 at 197.209 kb on - strand, within MMP_RS01045 at 197.322 kb on - strand, within MMP_RS01045 at 197.323 kb on + strand, within MMP_RS01045 at 197.325 kb on + strand, within MMP_RS01045 at 197.443 kb on - strand at 197.443 kb on - strand at 197.470 kb on + strand at 197.516 kb on - strand at 197.524 kb on + strand at 197.811 kb on - strand at 197.856 kb on - strand at 197.894 kb on - strand at 198.086 kb on - strand, within MMP_RS01055 at 198.086 kb on - strand, within MMP_RS01055 at 198.170 kb on + strand, within MMP_RS01055 at 198.406 kb on + strand at 198.406 kb on + strand at 198.411 kb on - strand at 198.411 kb on - strand at 198.412 kb on + strand at 198.444 kb on - strand at 198.569 kb on - strand at 198.605 kb on - strand at 198.640 kb on + strand at 198.644 kb on - strand at 198.820 kb on + strand, within MMP_RS01060 at 198.820 kb on + strand, within MMP_RS01060 at 198.903 kb on - strand, within MMP_RS01060 at 198.914 kb on + strand, within MMP_RS01060 at 198.930 kb on - strand, within MMP_RS01060 at 198.930 kb on - strand, within MMP_RS01060 at 198.930 kb on - strand, within MMP_RS01060 at 198.931 kb on + strand, within MMP_RS01060 at 198.959 kb on + strand, within MMP_RS01060 at 199.182 kb on - strand, within MMP_RS01060 at 199.182 kb on - strand, within MMP_RS01060 at 199.184 kb on - strand, within MMP_RS01060 at 199.184 kb on - strand, within MMP_RS01060 at 199.185 kb on + strand, within MMP_RS01060 at 199.186 kb on - strand, within MMP_RS01060 at 199.189 kb on - strand, within MMP_RS01060 at 199.197 kb on - strand, within MMP_RS01060 at 199.216 kb on - strand, within MMP_RS01060 at 199.283 kb on - strand, within MMP_RS01060 at 199.318 kb on + strand, within MMP_RS01060 at 199.345 kb on + strand, within MMP_RS01060 at 199.345 kb on + strand, within MMP_RS01060
Per-strain Table
Position Strand Gene LocusTag Fraction Formate with hypochlorite 5 mM remove 197,096 - MMP_RS01045 0.53 -0.0 197,209 - MMP_RS01045 0.66 -0.3 197,209 - MMP_RS01045 0.66 -0.5 197,322 - MMP_RS01045 0.78 -0.4 197,323 + MMP_RS01045 0.78 +0.5 197,325 + MMP_RS01045 0.78 -0.8 197,443 - +0.2 197,443 - -0.7 197,470 + +0.5 197,516 - -0.1 197,524 + +0.6 197,811 - +0.1 197,856 - -0.2 197,894 - +0.2 198,086 - MMP_RS01055 0.14 -0.1 198,086 - MMP_RS01055 0.14 +0.6 198,170 + MMP_RS01055 0.37 +0.5 198,406 + -0.8 198,406 + +0.0 198,411 - +0.4 198,411 - -0.5 198,412 + +0.4 198,444 - +0.3 198,569 - +0.1 198,605 - -0.8 198,640 + +0.2 198,644 - +0.4 198,820 + MMP_RS01060 0.18 +0.5 198,820 + MMP_RS01060 0.18 -0.4 198,903 - MMP_RS01060 0.27 +0.2 198,914 + MMP_RS01060 0.28 -0.3 198,930 - MMP_RS01060 0.29 +0.4 198,930 - MMP_RS01060 0.29 -0.9 198,930 - MMP_RS01060 0.29 -0.5 198,931 + MMP_RS01060 0.30 +0.6 198,959 + MMP_RS01060 0.33 -0.1 199,182 - MMP_RS01060 0.56 -0.4 199,182 - MMP_RS01060 0.56 -0.0 199,184 - MMP_RS01060 0.56 +0.3 199,184 - MMP_RS01060 0.56 +0.6 199,185 + MMP_RS01060 0.56 +0.5 199,186 - MMP_RS01060 0.56 -0.1 199,189 - MMP_RS01060 0.56 +0.0 199,197 - MMP_RS01060 0.57 +0.4 199,216 - MMP_RS01060 0.59 +0.3 199,283 - MMP_RS01060 0.66 +0.5 199,318 + MMP_RS01060 0.70 +0.3 199,345 + MMP_RS01060 0.73 +0.2 199,345 + MMP_RS01060 0.73 +0.0
Or see this region's nucleotide sequence