Experiment: Formate with hypochlorite 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS00150 and MMP_RS00155 are separated by 53 nucleotides MMP_RS00155 and MMP_RS00160 are separated by 67 nucleotides
MMP_RS00150: MMP_RS00150 - AAA family ATPase, at 31,747 to 32,862
_RS00150
MMP_RS00155: MMP_RS00155 - heavy metal-binding domain-containing protein, at 32,916 to 33,188
_RS00155
MMP_RS00160: MMP_RS00160 - DNA polymerase II large subunit, at 33,256 to 36,651
_RS00160
Position (kb) 32
33
34 Strain fitness (log2 ratio) -1
0
1 at 32.007 kb on - strand, within MMP_RS00150 at 32.061 kb on + strand, within MMP_RS00150 at 32.065 kb on + strand, within MMP_RS00150 at 32.176 kb on - strand, within MMP_RS00150 at 32.225 kb on - strand, within MMP_RS00150 at 32.304 kb on + strand, within MMP_RS00150 at 32.304 kb on + strand, within MMP_RS00150 at 32.304 kb on + strand, within MMP_RS00150 at 32.402 kb on - strand, within MMP_RS00150 at 32.474 kb on - strand, within MMP_RS00150 at 32.475 kb on + strand, within MMP_RS00150 at 32.860 kb on - strand at 32.909 kb on - strand at 32.918 kb on + strand at 32.947 kb on - strand, within MMP_RS00155 at 32.953 kb on - strand, within MMP_RS00155 at 33.015 kb on - strand, within MMP_RS00155 at 33.016 kb on + strand, within MMP_RS00155 at 33.016 kb on + strand, within MMP_RS00155 at 33.016 kb on + strand, within MMP_RS00155 at 33.217 kb on - strand at 33.231 kb on + strand at 33.232 kb on - strand at 33.232 kb on - strand at 33.233 kb on + strand at 33.233 kb on + strand at 33.233 kb on + strand at 33.234 kb on - strand at 33.235 kb on + strand at 33.666 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Formate with hypochlorite 5 mM remove 32,007 - MMP_RS00150 0.23 -1.0 32,061 + MMP_RS00150 0.28 -0.1 32,065 + MMP_RS00150 0.28 -0.2 32,176 - MMP_RS00150 0.38 +0.2 32,225 - MMP_RS00150 0.43 -1.0 32,304 + MMP_RS00150 0.50 +0.4 32,304 + MMP_RS00150 0.50 -0.4 32,304 + MMP_RS00150 0.50 +0.3 32,402 - MMP_RS00150 0.59 +0.2 32,474 - MMP_RS00150 0.65 +0.5 32,475 + MMP_RS00150 0.65 +0.2 32,860 - -0.3 32,909 - -0.3 32,918 + -0.2 32,947 - MMP_RS00155 0.11 -0.1 32,953 - MMP_RS00155 0.14 +0.2 33,015 - MMP_RS00155 0.36 +0.0 33,016 + MMP_RS00155 0.37 -0.1 33,016 + MMP_RS00155 0.37 +0.7 33,016 + MMP_RS00155 0.37 +0.6 33,217 - +0.0 33,231 + -0.6 33,232 - +0.6 33,232 - -0.7 33,233 + -0.4 33,233 + +0.4 33,233 + -0.0 33,234 - +0.1 33,235 + -0.2 33,666 - -1.0
Or see this region's nucleotide sequence