Strain Fitness in Dechlorosoma suillum PS around Dsui_2813

Experiment: ALP with sodium fluoride 30 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2812 and Dsui_2813 are separated by 4 nucleotidesDsui_2813 and Dsui_2814 are separated by 231 nucleotides Dsui_2812: Dsui_2812 - conserved hypothetical integral membrane protein, at 2,985,568 to 2,986,683 _2812 Dsui_2813: Dsui_2813 - exopolyphosphatase, at 2,986,688 to 2,988,223 _2813 Dsui_2814: Dsui_2814 - polyphosphate kinase 1, at 2,988,455 to 2,990,563 _2814 Position (kb) 2986 2987 2988 2989Strain fitness (log2 ratio) -2 -1 0 1 2at 2985.712 kb on + strandat 2985.793 kb on - strand, within Dsui_2812at 2985.812 kb on + strandat 2985.847 kb on - strand, within Dsui_2812at 2985.902 kb on + strandat 2985.927 kb on + strandat 2986.149 kb on - strand, within Dsui_2812at 2986.155 kb on - strand, within Dsui_2812at 2986.160 kb on - strand, within Dsui_2812at 2986.198 kb on - strand, within Dsui_2812at 2986.325 kb on - strand, within Dsui_2812at 2986.500 kb on + strandat 2986.508 kb on - strand, within Dsui_2812at 2986.508 kb on - strandat 2986.518 kb on + strand, within Dsui_2812at 2986.651 kb on + strandat 2986.655 kb on - strandat 2986.659 kb on - strandat 2986.828 kb on + strandat 2986.898 kb on + strand, within Dsui_2813at 2986.958 kb on - strand, within Dsui_2813at 2987.153 kb on + strand, within Dsui_2813at 2987.161 kb on - strand, within Dsui_2813at 2987.161 kb on - strand, within Dsui_2813at 2987.187 kb on + strand, within Dsui_2813at 2987.268 kb on + strand, within Dsui_2813at 2987.730 kb on - strand, within Dsui_2813at 2987.732 kb on + strand, within Dsui_2813at 2987.828 kb on + strandat 2987.833 kb on - strand, within Dsui_2813at 2987.923 kb on - strand, within Dsui_2813at 2987.923 kb on - strand, within Dsui_2813at 2987.925 kb on + strand, within Dsui_2813at 2987.952 kb on - strand, within Dsui_2813at 2988.102 kb on - strandat 2988.135 kb on + strandat 2988.162 kb on - strandat 2988.196 kb on - strandat 2988.263 kb on - strandat 2988.431 kb on + strandat 2988.431 kb on + strandat 2988.431 kb on + strandat 2988.439 kb on - strandat 2988.439 kb on - strandat 2988.439 kb on - strandat 2988.510 kb on + strandat 2988.598 kb on + strandat 2988.788 kb on - strand, within Dsui_2814at 2988.908 kb on + strand, within Dsui_2814at 2988.927 kb on - strandat 2989.078 kb on + strand, within Dsui_2814at 2989.106 kb on - strand, within Dsui_2814at 2989.145 kb on + strand, within Dsui_2814at 2989.145 kb on - strand, within Dsui_2814

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with sodium fluoride 30 mM
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2,985,712 + +0.9
2,985,793 - Dsui_2812 0.20 -0.7
2,985,812 + -0.1
2,985,847 - Dsui_2812 0.25 +0.9
2,985,902 + +0.9
2,985,927 + +0.9
2,986,149 - Dsui_2812 0.52 -1.1
2,986,155 - Dsui_2812 0.53 +0.9
2,986,160 - Dsui_2812 0.53 -0.1
2,986,198 - Dsui_2812 0.56 -0.1
2,986,325 - Dsui_2812 0.68 -1.5
2,986,500 + +0.9
2,986,508 - Dsui_2812 0.84 +0.3
2,986,508 - -0.1
2,986,518 + Dsui_2812 0.85 -0.7
2,986,651 + -0.7
2,986,655 - +2.1
2,986,659 - +0.0
2,986,828 + -0.1
2,986,898 + Dsui_2813 0.14 -0.7
2,986,958 - Dsui_2813 0.18 -1.1
2,987,153 + Dsui_2813 0.30 -0.1
2,987,161 - Dsui_2813 0.31 -0.0
2,987,161 - Dsui_2813 0.31 -0.7
2,987,187 + Dsui_2813 0.32 -1.5
2,987,268 + Dsui_2813 0.38 -0.7
2,987,730 - Dsui_2813 0.68 -1.9
2,987,732 + Dsui_2813 0.68 -2.1
2,987,828 + +0.9
2,987,833 - Dsui_2813 0.75 -1.7
2,987,923 - Dsui_2813 0.80 +0.0
2,987,923 - Dsui_2813 0.80 -1.9
2,987,925 + Dsui_2813 0.81 -0.7
2,987,952 - Dsui_2813 0.82 -0.9
2,988,102 - -0.1
2,988,135 + +0.9
2,988,162 - -0.9
2,988,196 - -1.1
2,988,263 - -0.8
2,988,431 + -0.0
2,988,431 + -0.1
2,988,431 + +0.1
2,988,439 - -0.1
2,988,439 - -1.9
2,988,439 - -0.7
2,988,510 + -0.1
2,988,598 + -0.4
2,988,788 - Dsui_2814 0.16 -0.1
2,988,908 + Dsui_2814 0.21 +0.9
2,988,927 - +0.9
2,989,078 + Dsui_2814 0.30 +0.9
2,989,106 - Dsui_2814 0.31 +0.9
2,989,145 + Dsui_2814 0.33 -0.7
2,989,145 - Dsui_2814 0.33 -0.7

Or see this region's nucleotide sequence