Experiment: ALP with sodium fluoride 30 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2812 and Dsui_2813 are separated by 4 nucleotides Dsui_2813 and Dsui_2814 are separated by 231 nucleotides
Dsui_2812: Dsui_2812 - conserved hypothetical integral membrane protein, at 2,985,568 to 2,986,683
_2812
Dsui_2813: Dsui_2813 - exopolyphosphatase, at 2,986,688 to 2,988,223
_2813
Dsui_2814: Dsui_2814 - polyphosphate kinase 1, at 2,988,455 to 2,990,563
_2814
Position (kb)
2986
2987
2988
2989 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2985.712 kb on + strand at 2985.793 kb on - strand, within Dsui_2812 at 2985.812 kb on + strand at 2985.847 kb on - strand, within Dsui_2812 at 2985.902 kb on + strand at 2985.927 kb on + strand at 2986.149 kb on - strand, within Dsui_2812 at 2986.155 kb on - strand, within Dsui_2812 at 2986.160 kb on - strand, within Dsui_2812 at 2986.198 kb on - strand, within Dsui_2812 at 2986.325 kb on - strand, within Dsui_2812 at 2986.500 kb on + strand at 2986.508 kb on - strand, within Dsui_2812 at 2986.508 kb on - strand at 2986.518 kb on + strand, within Dsui_2812 at 2986.651 kb on + strand at 2986.655 kb on - strand at 2986.659 kb on - strand at 2986.828 kb on + strand at 2986.898 kb on + strand, within Dsui_2813 at 2986.958 kb on - strand, within Dsui_2813 at 2987.153 kb on + strand, within Dsui_2813 at 2987.161 kb on - strand, within Dsui_2813 at 2987.161 kb on - strand, within Dsui_2813 at 2987.187 kb on + strand, within Dsui_2813 at 2987.268 kb on + strand, within Dsui_2813 at 2987.730 kb on - strand, within Dsui_2813 at 2987.732 kb on + strand, within Dsui_2813 at 2987.828 kb on + strand at 2987.833 kb on - strand, within Dsui_2813 at 2987.923 kb on - strand, within Dsui_2813 at 2987.923 kb on - strand, within Dsui_2813 at 2987.925 kb on + strand, within Dsui_2813 at 2987.952 kb on - strand, within Dsui_2813 at 2988.102 kb on - strand at 2988.135 kb on + strand at 2988.162 kb on - strand at 2988.196 kb on - strand at 2988.263 kb on - strand at 2988.431 kb on + strand at 2988.431 kb on + strand at 2988.431 kb on + strand at 2988.439 kb on - strand at 2988.439 kb on - strand at 2988.439 kb on - strand at 2988.510 kb on + strand at 2988.598 kb on + strand at 2988.788 kb on - strand, within Dsui_2814 at 2988.908 kb on + strand, within Dsui_2814 at 2988.927 kb on - strand at 2989.078 kb on + strand, within Dsui_2814 at 2989.106 kb on - strand, within Dsui_2814 at 2989.145 kb on + strand, within Dsui_2814 at 2989.145 kb on - strand, within Dsui_2814
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with sodium fluoride 30 mM remove 2,985,712 + +0.9 2,985,793 - Dsui_2812 0.20 -0.7 2,985,812 + -0.1 2,985,847 - Dsui_2812 0.25 +0.9 2,985,902 + +0.9 2,985,927 + +0.9 2,986,149 - Dsui_2812 0.52 -1.1 2,986,155 - Dsui_2812 0.53 +0.9 2,986,160 - Dsui_2812 0.53 -0.1 2,986,198 - Dsui_2812 0.56 -0.1 2,986,325 - Dsui_2812 0.68 -1.5 2,986,500 + +0.9 2,986,508 - Dsui_2812 0.84 +0.3 2,986,508 - -0.1 2,986,518 + Dsui_2812 0.85 -0.7 2,986,651 + -0.7 2,986,655 - +2.1 2,986,659 - +0.0 2,986,828 + -0.1 2,986,898 + Dsui_2813 0.14 -0.7 2,986,958 - Dsui_2813 0.18 -1.1 2,987,153 + Dsui_2813 0.30 -0.1 2,987,161 - Dsui_2813 0.31 -0.0 2,987,161 - Dsui_2813 0.31 -0.7 2,987,187 + Dsui_2813 0.32 -1.5 2,987,268 + Dsui_2813 0.38 -0.7 2,987,730 - Dsui_2813 0.68 -1.9 2,987,732 + Dsui_2813 0.68 -2.1 2,987,828 + +0.9 2,987,833 - Dsui_2813 0.75 -1.7 2,987,923 - Dsui_2813 0.80 +0.0 2,987,923 - Dsui_2813 0.80 -1.9 2,987,925 + Dsui_2813 0.81 -0.7 2,987,952 - Dsui_2813 0.82 -0.9 2,988,102 - -0.1 2,988,135 + +0.9 2,988,162 - -0.9 2,988,196 - -1.1 2,988,263 - -0.8 2,988,431 + -0.0 2,988,431 + -0.1 2,988,431 + +0.1 2,988,439 - -0.1 2,988,439 - -1.9 2,988,439 - -0.7 2,988,510 + -0.1 2,988,598 + -0.4 2,988,788 - Dsui_2814 0.16 -0.1 2,988,908 + Dsui_2814 0.21 +0.9 2,988,927 - +0.9 2,989,078 + Dsui_2814 0.30 +0.9 2,989,106 - Dsui_2814 0.31 +0.9 2,989,145 + Dsui_2814 0.33 -0.7 2,989,145 - Dsui_2814 0.33 -0.7
Or see this region's nucleotide sequence