Experiment: ALP with sodium fluoride 30 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2773 and Dsui_2775 are separated by 951 nucleotides Dsui_2775 and Dsui_2776 are separated by 25 nucleotides Dsui_2776 and Dsui_2777 are separated by 55 nucleotides
Dsui_2773: Dsui_2773 - putative enzyme involved in biosynthesis of extracellular polysaccharides, at 2,936,890 to 2,937,207
_2773
Dsui_2775: Dsui_2775 - hypothetical protein, at 2,938,159 to 2,938,806
_2775
Dsui_2776: Dsui_2776 - putative pyrophosphatase, at 2,938,832 to 2,939,236
_2776
Dsui_2777: Dsui_2777 - aminoacyl-histidine dipeptidase, at 2,939,292 to 2,940,860
_2777
Position (kb)
2938
2939 Strain fitness (log2 ratio)
-2
-1
0
1 at 2937.346 kb on + strand at 2937.441 kb on + strand at 2937.468 kb on + strand at 2937.528 kb on - strand at 2937.548 kb on - strand at 2937.619 kb on - strand at 2937.771 kb on + strand at 2937.779 kb on - strand at 2937.794 kb on + strand at 2937.993 kb on + strand at 2938.006 kb on - strand at 2938.008 kb on + strand at 2938.208 kb on + strand at 2938.439 kb on + strand, within Dsui_2775 at 2938.454 kb on + strand, within Dsui_2775 at 2938.529 kb on + strand, within Dsui_2775 at 2938.537 kb on - strand, within Dsui_2775 at 2938.598 kb on + strand, within Dsui_2775 at 2938.801 kb on + strand at 2939.080 kb on + strand at 2939.160 kb on + strand at 2939.231 kb on + strand at 2939.231 kb on + strand at 2939.239 kb on - strand at 2939.239 kb on - strand at 2939.239 kb on - strand at 2939.240 kb on - strand at 2939.247 kb on + strand at 2939.332 kb on + strand at 2939.347 kb on + strand at 2939.414 kb on + strand at 2939.462 kb on - strand at 2939.675 kb on + strand, within Dsui_2777 at 2939.685 kb on + strand, within Dsui_2777 at 2939.765 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with sodium fluoride 30 mM remove 2,937,346 + +0.6 2,937,441 + -0.3 2,937,468 + -0.3 2,937,528 - -0.7 2,937,548 - +0.9 2,937,619 - -2.1 2,937,771 + -0.8 2,937,779 - -0.1 2,937,794 + -2.1 2,937,993 + -0.2 2,938,006 - +0.9 2,938,008 + -0.3 2,938,208 + -0.4 2,938,439 + Dsui_2775 0.43 +0.9 2,938,454 + Dsui_2775 0.46 -1.6 2,938,529 + Dsui_2775 0.57 -1.7 2,938,537 - Dsui_2775 0.58 -2.7 2,938,598 + Dsui_2775 0.68 -1.5 2,938,801 + -0.1 2,939,080 + +0.9 2,939,160 + +0.9 2,939,231 + -0.6 2,939,231 + -0.6 2,939,239 - -0.1 2,939,239 - +0.9 2,939,239 - +0.9 2,939,240 - +0.9 2,939,247 + -0.8 2,939,332 + -0.0 2,939,347 + +0.9 2,939,414 + -0.6 2,939,462 - -0.7 2,939,675 + Dsui_2777 0.24 +0.9 2,939,685 + Dsui_2777 0.25 +0.1 2,939,765 - +0.9
Or see this region's nucleotide sequence