Strain Fitness in Dechlorosoma suillum PS around Dsui_2775

Experiment: ALP with sodium fluoride 30 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2773 and Dsui_2775 are separated by 951 nucleotidesDsui_2775 and Dsui_2776 are separated by 25 nucleotidesDsui_2776 and Dsui_2777 are separated by 55 nucleotides Dsui_2773: Dsui_2773 - putative enzyme involved in biosynthesis of extracellular polysaccharides, at 2,936,890 to 2,937,207 _2773 Dsui_2775: Dsui_2775 - hypothetical protein, at 2,938,159 to 2,938,806 _2775 Dsui_2776: Dsui_2776 - putative pyrophosphatase, at 2,938,832 to 2,939,236 _2776 Dsui_2777: Dsui_2777 - aminoacyl-histidine dipeptidase, at 2,939,292 to 2,940,860 _2777 Position (kb) 2938 2939Strain fitness (log2 ratio) -2 -1 0 1at 2937.346 kb on + strandat 2937.441 kb on + strandat 2937.468 kb on + strandat 2937.528 kb on - strandat 2937.548 kb on - strandat 2937.619 kb on - strandat 2937.771 kb on + strandat 2937.779 kb on - strandat 2937.794 kb on + strandat 2937.993 kb on + strandat 2938.006 kb on - strandat 2938.008 kb on + strandat 2938.208 kb on + strandat 2938.439 kb on + strand, within Dsui_2775at 2938.454 kb on + strand, within Dsui_2775at 2938.529 kb on + strand, within Dsui_2775at 2938.537 kb on - strand, within Dsui_2775at 2938.598 kb on + strand, within Dsui_2775at 2938.801 kb on + strandat 2939.080 kb on + strandat 2939.160 kb on + strandat 2939.231 kb on + strandat 2939.231 kb on + strandat 2939.239 kb on - strandat 2939.239 kb on - strandat 2939.239 kb on - strandat 2939.240 kb on - strandat 2939.247 kb on + strandat 2939.332 kb on + strandat 2939.347 kb on + strandat 2939.414 kb on + strandat 2939.462 kb on - strandat 2939.675 kb on + strand, within Dsui_2777at 2939.685 kb on + strand, within Dsui_2777at 2939.765 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with sodium fluoride 30 mM
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2,937,346 + +0.6
2,937,441 + -0.3
2,937,468 + -0.3
2,937,528 - -0.7
2,937,548 - +0.9
2,937,619 - -2.1
2,937,771 + -0.8
2,937,779 - -0.1
2,937,794 + -2.1
2,937,993 + -0.2
2,938,006 - +0.9
2,938,008 + -0.3
2,938,208 + -0.4
2,938,439 + Dsui_2775 0.43 +0.9
2,938,454 + Dsui_2775 0.46 -1.6
2,938,529 + Dsui_2775 0.57 -1.7
2,938,537 - Dsui_2775 0.58 -2.7
2,938,598 + Dsui_2775 0.68 -1.5
2,938,801 + -0.1
2,939,080 + +0.9
2,939,160 + +0.9
2,939,231 + -0.6
2,939,231 + -0.6
2,939,239 - -0.1
2,939,239 - +0.9
2,939,239 - +0.9
2,939,240 - +0.9
2,939,247 + -0.8
2,939,332 + -0.0
2,939,347 + +0.9
2,939,414 + -0.6
2,939,462 - -0.7
2,939,675 + Dsui_2777 0.24 +0.9
2,939,685 + Dsui_2777 0.25 +0.1
2,939,765 - +0.9

Or see this region's nucleotide sequence