Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19425

Experiment: succinate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19420 and BWI76_RS19425 are separated by 151 nucleotidesBWI76_RS19425 and BWI76_RS19430 are separated by 141 nucleotides BWI76_RS19420: BWI76_RS19420 - Fe-S-binding ATPase, at 4,050,274 to 4,051,383 _RS19420 BWI76_RS19425: BWI76_RS19425 - methionine--tRNA ligase, at 4,051,535 to 4,053,568 _RS19425 BWI76_RS19430: BWI76_RS19430 - MolR family transcriptional regulator, at 4,053,710 to 4,057,426 _RS19430 Position (kb) 4051 4052 4053 4054Strain fitness (log2 ratio) -1 0 1at 4050.641 kb on + strand, within BWI76_RS19420at 4050.752 kb on - strand, within BWI76_RS19420at 4050.757 kb on - strand, within BWI76_RS19420at 4050.797 kb on + strand, within BWI76_RS19420at 4050.805 kb on - strand, within BWI76_RS19420at 4051.036 kb on - strand, within BWI76_RS19420at 4051.132 kb on + strand, within BWI76_RS19420at 4051.169 kb on + strand, within BWI76_RS19420at 4051.177 kb on - strand, within BWI76_RS19420at 4051.191 kb on + strand, within BWI76_RS19420at 4051.251 kb on + strand, within BWI76_RS19420at 4051.467 kb on - strandat 4053.983 kb on + strandat 4053.991 kb on - strandat 4054.021 kb on + strandat 4054.047 kb on - strandat 4054.276 kb on + strand, within BWI76_RS19430at 4054.415 kb on + strand, within BWI76_RS19430at 4054.425 kb on - strand, within BWI76_RS19430at 4054.434 kb on + strand, within BWI76_RS19430at 4054.442 kb on - strand, within BWI76_RS19430

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Per-strain Table

Position Strand Gene LocusTag Fraction succinate (C)
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4,050,641 + BWI76_RS19420 0.33 -1.6
4,050,752 - BWI76_RS19420 0.43 -0.3
4,050,757 - BWI76_RS19420 0.44 -0.9
4,050,797 + BWI76_RS19420 0.47 -1.3
4,050,805 - BWI76_RS19420 0.48 -0.6
4,051,036 - BWI76_RS19420 0.69 +0.2
4,051,132 + BWI76_RS19420 0.77 -1.1
4,051,169 + BWI76_RS19420 0.81 -0.7
4,051,177 - BWI76_RS19420 0.81 -0.6
4,051,191 + BWI76_RS19420 0.83 -0.8
4,051,251 + BWI76_RS19420 0.88 +0.5
4,051,467 - +0.9
4,053,983 + -0.2
4,053,991 - +0.0
4,054,021 + -0.9
4,054,047 - +0.5
4,054,276 + BWI76_RS19430 0.15 +0.2
4,054,415 + BWI76_RS19430 0.19 +0.5
4,054,425 - BWI76_RS19430 0.19 -0.1
4,054,434 + BWI76_RS19430 0.19 +0.9
4,054,442 - BWI76_RS19430 0.20 +0.6

Or see this region's nucleotide sequence