Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15405 and BWI76_RS15410 are separated by 139 nucleotides BWI76_RS15410 and BWI76_RS15415 are separated by 386 nucleotides BWI76_RS15415 and BWI76_RS15420 are separated by 209 nucleotides
BWI76_RS15405: BWI76_RS15405 - diguanylate phosphodiesterase, at 3,226,983 to 3,228,200
_RS15405
BWI76_RS15410: BWI76_RS15410 - N-acetyltransferase, at 3,228,340 to 3,228,774
_RS15410
BWI76_RS15415: BWI76_RS15415 - LacI family transcriptional regulator, at 3,229,161 to 3,230,231
_RS15415
BWI76_RS15420: BWI76_RS15420 - beta-D-galactosidase, at 3,230,441 to 3,233,548
_RS15420
Position (kb)
3229
3230
3231 Strain fitness (log2 ratio)
-2
-1
0
1 at 3228.186 kb on - strand at 3228.197 kb on + strand at 3228.197 kb on + strand at 3228.197 kb on + strand at 3228.205 kb on - strand at 3228.205 kb on - strand at 3228.234 kb on - strand at 3228.236 kb on + strand at 3228.280 kb on - strand at 3228.298 kb on - strand at 3228.314 kb on - strand at 3228.513 kb on + strand, within BWI76_RS15410 at 3228.528 kb on - strand, within BWI76_RS15410 at 3228.534 kb on - strand, within BWI76_RS15410 at 3228.665 kb on + strand, within BWI76_RS15410 at 3228.690 kb on + strand, within BWI76_RS15410 at 3229.188 kb on - strand at 3229.188 kb on - strand at 3229.241 kb on - strand at 3229.300 kb on + strand, within BWI76_RS15415 at 3229.379 kb on + strand, within BWI76_RS15415 at 3229.429 kb on - strand, within BWI76_RS15415 at 3229.594 kb on - strand, within BWI76_RS15415 at 3230.228 kb on + strand at 3230.319 kb on - strand at 3230.489 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 3,228,186 - +0.5 3,228,197 + -0.5 3,228,197 + -0.8 3,228,197 + -0.2 3,228,205 - -0.2 3,228,205 - -0.2 3,228,234 - +0.3 3,228,236 + -2.0 3,228,280 - -2.0 3,228,298 - +1.3 3,228,314 - -0.3 3,228,513 + BWI76_RS15410 0.40 -1.8 3,228,528 - BWI76_RS15410 0.43 -0.4 3,228,534 - BWI76_RS15410 0.45 +0.3 3,228,665 + BWI76_RS15410 0.75 +0.3 3,228,690 + BWI76_RS15410 0.80 -0.8 3,229,188 - -0.4 3,229,188 - -0.4 3,229,241 - -0.3 3,229,300 + BWI76_RS15415 0.13 -0.7 3,229,379 + BWI76_RS15415 0.20 +0.8 3,229,429 - BWI76_RS15415 0.25 +0.4 3,229,594 - BWI76_RS15415 0.40 -0.1 3,230,228 + +1.5 3,230,319 - -1.1 3,230,489 + -0.3
Or see this region's nucleotide sequence