Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10315 and BWI76_RS10320 are separated by 79 nucleotides BWI76_RS10320 and BWI76_RS10325 are separated by 199 nucleotides
BWI76_RS10315: BWI76_RS10315 - MFS transporter, at 2,183,574 to 2,184,866
_RS10315
BWI76_RS10320: BWI76_RS10320 - alpha-glucosidase/alpha-galactosidase, at 2,184,946 to 2,186,253
_RS10320
BWI76_RS10325: BWI76_RS10325 - AraC family transcriptional regulator, at 2,186,453 to 2,187,292
_RS10325
Position (kb)
2184
2185
2186
2187 Strain fitness (log2 ratio)
-1
0
1
2 at 2184.087 kb on + strand, within BWI76_RS10315 at 2184.097 kb on + strand, within BWI76_RS10315 at 2184.325 kb on + strand, within BWI76_RS10315 at 2184.325 kb on + strand, within BWI76_RS10315 at 2184.332 kb on - strand, within BWI76_RS10315 at 2184.535 kb on - strand, within BWI76_RS10315 at 2184.717 kb on + strand, within BWI76_RS10315 at 2184.752 kb on + strand at 2184.760 kb on - strand at 2184.934 kb on + strand at 2185.055 kb on + strand at 2185.058 kb on - strand at 2185.224 kb on - strand, within BWI76_RS10320 at 2185.402 kb on - strand at 2185.475 kb on + strand, within BWI76_RS10320 at 2185.547 kb on + strand, within BWI76_RS10320 at 2185.569 kb on + strand, within BWI76_RS10320 at 2185.710 kb on + strand, within BWI76_RS10320 at 2185.730 kb on - strand, within BWI76_RS10320 at 2185.796 kb on + strand, within BWI76_RS10320 at 2185.868 kb on - strand, within BWI76_RS10320 at 2186.156 kb on + strand at 2186.159 kb on - strand at 2186.183 kb on + strand at 2186.403 kb on - strand at 2186.469 kb on + strand at 2186.647 kb on - strand, within BWI76_RS10325 at 2186.723 kb on - strand, within BWI76_RS10325 at 2186.939 kb on - strand, within BWI76_RS10325 at 2186.960 kb on - strand, within BWI76_RS10325 at 2187.013 kb on - strand, within BWI76_RS10325 at 2187.013 kb on - strand, within BWI76_RS10325 at 2187.042 kb on - strand, within BWI76_RS10325 at 2187.067 kb on + strand, within BWI76_RS10325 at 2187.067 kb on + strand, within BWI76_RS10325 at 2187.075 kb on + strand, within BWI76_RS10325 at 2187.090 kb on - strand, within BWI76_RS10325 at 2187.131 kb on - strand, within BWI76_RS10325 at 2187.187 kb on - strand, within BWI76_RS10325 at 2187.187 kb on - strand, within BWI76_RS10325 at 2187.242 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 2,184,087 + BWI76_RS10315 0.40 -0.9 2,184,097 + BWI76_RS10315 0.40 +0.0 2,184,325 + BWI76_RS10315 0.58 -0.6 2,184,325 + BWI76_RS10315 0.58 -0.2 2,184,332 - BWI76_RS10315 0.59 -0.5 2,184,535 - BWI76_RS10315 0.74 -0.8 2,184,717 + BWI76_RS10315 0.88 -0.3 2,184,752 + +0.4 2,184,760 - -0.8 2,184,934 + +0.5 2,185,055 + -0.7 2,185,058 - +0.5 2,185,224 - BWI76_RS10320 0.21 -0.7 2,185,402 - -0.5 2,185,475 + BWI76_RS10320 0.40 -0.1 2,185,547 + BWI76_RS10320 0.46 +1.2 2,185,569 + BWI76_RS10320 0.48 +0.1 2,185,710 + BWI76_RS10320 0.58 +0.2 2,185,730 - BWI76_RS10320 0.60 +1.2 2,185,796 + BWI76_RS10320 0.65 +0.3 2,185,868 - BWI76_RS10320 0.70 +0.6 2,186,156 + +0.0 2,186,159 - +2.1 2,186,183 + -0.3 2,186,403 - -0.4 2,186,469 + +0.7 2,186,647 - BWI76_RS10325 0.23 +0.2 2,186,723 - BWI76_RS10325 0.32 -0.3 2,186,939 - BWI76_RS10325 0.58 -0.2 2,186,960 - BWI76_RS10325 0.60 -0.5 2,187,013 - BWI76_RS10325 0.67 -0.4 2,187,013 - BWI76_RS10325 0.67 +0.5 2,187,042 - BWI76_RS10325 0.70 -1.1 2,187,067 + BWI76_RS10325 0.73 +0.3 2,187,067 + BWI76_RS10325 0.73 +0.9 2,187,075 + BWI76_RS10325 0.74 -1.2 2,187,090 - BWI76_RS10325 0.76 +0.5 2,187,131 - BWI76_RS10325 0.81 +0.0 2,187,187 - BWI76_RS10325 0.87 +0.5 2,187,187 - BWI76_RS10325 0.87 -0.7 2,187,242 - +0.2
Or see this region's nucleotide sequence