Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10320

Experiment: succinate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS10315 and BWI76_RS10320 are separated by 79 nucleotidesBWI76_RS10320 and BWI76_RS10325 are separated by 199 nucleotides BWI76_RS10315: BWI76_RS10315 - MFS transporter, at 2,183,574 to 2,184,866 _RS10315 BWI76_RS10320: BWI76_RS10320 - alpha-glucosidase/alpha-galactosidase, at 2,184,946 to 2,186,253 _RS10320 BWI76_RS10325: BWI76_RS10325 - AraC family transcriptional regulator, at 2,186,453 to 2,187,292 _RS10325 Position (kb) 2184 2185 2186 2187Strain fitness (log2 ratio) -1 0 1 2at 2184.087 kb on + strand, within BWI76_RS10315at 2184.097 kb on + strand, within BWI76_RS10315at 2184.325 kb on + strand, within BWI76_RS10315at 2184.325 kb on + strand, within BWI76_RS10315at 2184.332 kb on - strand, within BWI76_RS10315at 2184.535 kb on - strand, within BWI76_RS10315at 2184.717 kb on + strand, within BWI76_RS10315at 2184.752 kb on + strandat 2184.760 kb on - strandat 2184.934 kb on + strandat 2185.055 kb on + strandat 2185.058 kb on - strandat 2185.224 kb on - strand, within BWI76_RS10320at 2185.402 kb on - strandat 2185.475 kb on + strand, within BWI76_RS10320at 2185.547 kb on + strand, within BWI76_RS10320at 2185.569 kb on + strand, within BWI76_RS10320at 2185.710 kb on + strand, within BWI76_RS10320at 2185.730 kb on - strand, within BWI76_RS10320at 2185.796 kb on + strand, within BWI76_RS10320at 2185.868 kb on - strand, within BWI76_RS10320at 2186.156 kb on + strandat 2186.159 kb on - strandat 2186.183 kb on + strandat 2186.403 kb on - strandat 2186.469 kb on + strandat 2186.647 kb on - strand, within BWI76_RS10325at 2186.723 kb on - strand, within BWI76_RS10325at 2186.939 kb on - strand, within BWI76_RS10325at 2186.960 kb on - strand, within BWI76_RS10325at 2187.013 kb on - strand, within BWI76_RS10325at 2187.013 kb on - strand, within BWI76_RS10325at 2187.042 kb on - strand, within BWI76_RS10325at 2187.067 kb on + strand, within BWI76_RS10325at 2187.067 kb on + strand, within BWI76_RS10325at 2187.075 kb on + strand, within BWI76_RS10325at 2187.090 kb on - strand, within BWI76_RS10325at 2187.131 kb on - strand, within BWI76_RS10325at 2187.187 kb on - strand, within BWI76_RS10325at 2187.187 kb on - strand, within BWI76_RS10325at 2187.242 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction succinate (C)
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2,184,087 + BWI76_RS10315 0.40 -0.9
2,184,097 + BWI76_RS10315 0.40 +0.0
2,184,325 + BWI76_RS10315 0.58 -0.6
2,184,325 + BWI76_RS10315 0.58 -0.2
2,184,332 - BWI76_RS10315 0.59 -0.5
2,184,535 - BWI76_RS10315 0.74 -0.8
2,184,717 + BWI76_RS10315 0.88 -0.3
2,184,752 + +0.4
2,184,760 - -0.8
2,184,934 + +0.5
2,185,055 + -0.7
2,185,058 - +0.5
2,185,224 - BWI76_RS10320 0.21 -0.7
2,185,402 - -0.5
2,185,475 + BWI76_RS10320 0.40 -0.1
2,185,547 + BWI76_RS10320 0.46 +1.2
2,185,569 + BWI76_RS10320 0.48 +0.1
2,185,710 + BWI76_RS10320 0.58 +0.2
2,185,730 - BWI76_RS10320 0.60 +1.2
2,185,796 + BWI76_RS10320 0.65 +0.3
2,185,868 - BWI76_RS10320 0.70 +0.6
2,186,156 + +0.0
2,186,159 - +2.1
2,186,183 + -0.3
2,186,403 - -0.4
2,186,469 + +0.7
2,186,647 - BWI76_RS10325 0.23 +0.2
2,186,723 - BWI76_RS10325 0.32 -0.3
2,186,939 - BWI76_RS10325 0.58 -0.2
2,186,960 - BWI76_RS10325 0.60 -0.5
2,187,013 - BWI76_RS10325 0.67 -0.4
2,187,013 - BWI76_RS10325 0.67 +0.5
2,187,042 - BWI76_RS10325 0.70 -1.1
2,187,067 + BWI76_RS10325 0.73 +0.3
2,187,067 + BWI76_RS10325 0.73 +0.9
2,187,075 + BWI76_RS10325 0.74 -1.2
2,187,090 - BWI76_RS10325 0.76 +0.5
2,187,131 - BWI76_RS10325 0.81 +0.0
2,187,187 - BWI76_RS10325 0.87 +0.5
2,187,187 - BWI76_RS10325 0.87 -0.7
2,187,242 - +0.2

Or see this region's nucleotide sequence