Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09095

Experiment: succinate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09090 and BWI76_RS09095 are separated by 12 nucleotidesBWI76_RS09095 and BWI76_RS09100 are separated by 37 nucleotides BWI76_RS09090: BWI76_RS09090 - beta-aspartyl-peptidase, at 1,919,263 to 1,920,204 _RS09090 BWI76_RS09095: BWI76_RS09095 - glutathione ABC transporter ATP-binding protein GsiA, at 1,920,217 to 1,922,070 _RS09095 BWI76_RS09100: BWI76_RS09100 - glutathione ABC transporter substrate-binding protein GsiB, at 1,922,108 to 1,923,646 _RS09100 Position (kb) 1920 1921 1922 1923Strain fitness (log2 ratio) -1 0 1 2 3at 1919.319 kb on + strandat 1919.343 kb on + strandat 1919.348 kb on - strandat 1919.353 kb on - strandat 1919.403 kb on - strand, within BWI76_RS09090at 1919.416 kb on - strand, within BWI76_RS09090at 1919.476 kb on - strand, within BWI76_RS09090at 1919.975 kb on - strand, within BWI76_RS09090at 1920.075 kb on + strand, within BWI76_RS09090at 1920.158 kb on + strandat 1920.266 kb on + strandat 1920.323 kb on + strandat 1920.821 kb on - strand, within BWI76_RS09095at 1921.004 kb on + strand, within BWI76_RS09095at 1921.037 kb on + strand, within BWI76_RS09095at 1921.045 kb on - strand, within BWI76_RS09095at 1921.088 kb on + strand, within BWI76_RS09095at 1921.154 kb on + strand, within BWI76_RS09095at 1921.255 kb on + strand, within BWI76_RS09095at 1921.436 kb on - strand, within BWI76_RS09095at 1921.998 kb on - strandat 1922.048 kb on + strandat 1922.112 kb on - strandat 1922.267 kb on + strand, within BWI76_RS09100at 1922.338 kb on + strand, within BWI76_RS09100at 1922.340 kb on + strand, within BWI76_RS09100at 1922.373 kb on - strand, within BWI76_RS09100at 1922.390 kb on + strand, within BWI76_RS09100at 1922.482 kb on + strand, within BWI76_RS09100at 1922.996 kb on - strand, within BWI76_RS09100

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Per-strain Table

Position Strand Gene LocusTag Fraction succinate (C)
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1,919,319 + -0.5
1,919,343 + +1.4
1,919,348 - +2.0
1,919,353 - +1.9
1,919,403 - BWI76_RS09090 0.15 +2.1
1,919,416 - BWI76_RS09090 0.16 +1.2
1,919,476 - BWI76_RS09090 0.23 +2.1
1,919,975 - BWI76_RS09090 0.76 +2.1
1,920,075 + BWI76_RS09090 0.86 -0.6
1,920,158 + -0.9
1,920,266 + +2.2
1,920,323 + +2.6
1,920,821 - BWI76_RS09095 0.33 +2.4
1,921,004 + BWI76_RS09095 0.42 +3.1
1,921,037 + BWI76_RS09095 0.44 +2.5
1,921,045 - BWI76_RS09095 0.45 +2.3
1,921,088 + BWI76_RS09095 0.47 +2.4
1,921,154 + BWI76_RS09095 0.51 +2.5
1,921,255 + BWI76_RS09095 0.56 +2.6
1,921,436 - BWI76_RS09095 0.66 +3.7
1,921,998 - +1.8
1,922,048 + +1.0
1,922,112 - +1.7
1,922,267 + BWI76_RS09100 0.10 +0.4
1,922,338 + BWI76_RS09100 0.15 +0.7
1,922,340 + BWI76_RS09100 0.15 -0.2
1,922,373 - BWI76_RS09100 0.17 +2.7
1,922,390 + BWI76_RS09100 0.18 +1.0
1,922,482 + BWI76_RS09100 0.24 +0.5
1,922,996 - BWI76_RS09100 0.58 +2.0

Or see this region's nucleotide sequence