Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03055 and BWI76_RS03060 are separated by 42 nucleotides BWI76_RS03060 and BWI76_RS03065 are separated by 86 nucleotides
BWI76_RS03055: BWI76_RS03055 - LPS export ABC transporter permease LptG, at 625,303 to 626,385
_RS03055
BWI76_RS03060: BWI76_RS03060 - ATP-binding protein, at 626,428 to 627,930
_RS03060
BWI76_RS03065: BWI76_RS03065 - hypothetical protein, at 628,017 to 628,838
_RS03065
Position (kb) 626
627
628 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 626.563 kb on - strand at 626.650 kb on + strand, within BWI76_RS03060 at 626.658 kb on - strand, within BWI76_RS03060 at 626.660 kb on + strand, within BWI76_RS03060 at 626.842 kb on + strand, within BWI76_RS03060 at 627.000 kb on - strand, within BWI76_RS03060 at 627.050 kb on + strand, within BWI76_RS03060 at 627.250 kb on - strand, within BWI76_RS03060 at 627.315 kb on - strand, within BWI76_RS03060 at 627.315 kb on - strand, within BWI76_RS03060 at 627.315 kb on - strand, within BWI76_RS03060 at 627.357 kb on + strand, within BWI76_RS03060 at 627.357 kb on + strand, within BWI76_RS03060 at 627.357 kb on + strand, within BWI76_RS03060 at 627.510 kb on - strand, within BWI76_RS03060 at 627.546 kb on - strand, within BWI76_RS03060 at 627.715 kb on + strand, within BWI76_RS03060 at 627.890 kb on + strand at 628.034 kb on + strand at 628.225 kb on - strand, within BWI76_RS03065 at 628.343 kb on + strand, within BWI76_RS03065 at 628.375 kb on - strand, within BWI76_RS03065 at 628.385 kb on + strand, within BWI76_RS03065 at 628.595 kb on + strand, within BWI76_RS03065 at 628.603 kb on - strand, within BWI76_RS03065 at 628.610 kb on + strand, within BWI76_RS03065 at 628.625 kb on - strand, within BWI76_RS03065 at 628.625 kb on - strand, within BWI76_RS03065 at 628.634 kb on + strand, within BWI76_RS03065 at 628.727 kb on - strand, within BWI76_RS03065 at 628.738 kb on - strand, within BWI76_RS03065 at 628.743 kb on - strand, within BWI76_RS03065 at 628.745 kb on + strand, within BWI76_RS03065
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 626,563 - +0.6 626,650 + BWI76_RS03060 0.15 +0.2 626,658 - BWI76_RS03060 0.15 +0.4 626,660 + BWI76_RS03060 0.15 +0.0 626,842 + BWI76_RS03060 0.28 +0.3 627,000 - BWI76_RS03060 0.38 -0.3 627,050 + BWI76_RS03060 0.41 +0.1 627,250 - BWI76_RS03060 0.55 -1.9 627,315 - BWI76_RS03060 0.59 -1.2 627,315 - BWI76_RS03060 0.59 +0.8 627,315 - BWI76_RS03060 0.59 -0.4 627,357 + BWI76_RS03060 0.62 -0.8 627,357 + BWI76_RS03060 0.62 +0.6 627,357 + BWI76_RS03060 0.62 +0.3 627,510 - BWI76_RS03060 0.72 +1.5 627,546 - BWI76_RS03060 0.74 +0.0 627,715 + BWI76_RS03060 0.86 +1.1 627,890 + +1.3 628,034 + -0.3 628,225 - BWI76_RS03065 0.25 -0.1 628,343 + BWI76_RS03065 0.40 -0.3 628,375 - BWI76_RS03065 0.44 +0.0 628,385 + BWI76_RS03065 0.45 +1.5 628,595 + BWI76_RS03065 0.70 -0.0 628,603 - BWI76_RS03065 0.71 -0.7 628,610 + BWI76_RS03065 0.72 +0.1 628,625 - BWI76_RS03065 0.74 +0.9 628,625 - BWI76_RS03065 0.74 -0.1 628,634 + BWI76_RS03065 0.75 -0.3 628,727 - BWI76_RS03065 0.86 -0.1 628,738 - BWI76_RS03065 0.88 -3.1 628,743 - BWI76_RS03065 0.88 -0.1 628,745 + BWI76_RS03065 0.89 -1.3
Or see this region's nucleotide sequence