Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00095 and BWI76_RS00100 are separated by 147 nucleotides BWI76_RS00100 and BWI76_RS00105 are separated by 37 nucleotides BWI76_RS00105 and BWI76_RS00110 are separated by 48 nucleotides
BWI76_RS00095: BWI76_RS00095 - DNA-binding transcriptional regulator, at 18,362 to 19,321
_RS00095
BWI76_RS00100: BWI76_RS00100 - hypothetical protein, at 19,469 to 20,206
_RS00100
BWI76_RS00105: BWI76_RS00105 - NAD(P)H-dependent oxidoreductase, at 20,244 to 20,810
_RS00105
BWI76_RS00110: BWI76_RS00110 - adenine permease PurP, at 20,859 to 22,199
_RS00110
Position (kb) 19
20
21 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 18.544 kb on - strand at 18.570 kb on + strand, within BWI76_RS00095 at 18.904 kb on + strand, within BWI76_RS00095 at 19.096 kb on + strand, within BWI76_RS00095 at 19.227 kb on + strand at 19.300 kb on + strand at 19.308 kb on - strand at 19.308 kb on - strand at 19.313 kb on - strand at 19.623 kb on - strand, within BWI76_RS00100 at 19.625 kb on - strand, within BWI76_RS00100 at 19.967 kb on + strand, within BWI76_RS00100 at 20.030 kb on + strand, within BWI76_RS00100 at 20.038 kb on - strand, within BWI76_RS00100 at 20.053 kb on - strand, within BWI76_RS00100 at 20.123 kb on + strand, within BWI76_RS00100 at 20.244 kb on - strand at 20.281 kb on - strand at 20.314 kb on + strand, within BWI76_RS00105 at 20.322 kb on - strand, within BWI76_RS00105 at 20.350 kb on - strand, within BWI76_RS00105 at 20.436 kb on - strand, within BWI76_RS00105 at 20.467 kb on - strand, within BWI76_RS00105 at 20.495 kb on - strand, within BWI76_RS00105 at 20.502 kb on + strand, within BWI76_RS00105 at 20.588 kb on - strand, within BWI76_RS00105 at 20.715 kb on - strand, within BWI76_RS00105 at 20.806 kb on - strand at 20.835 kb on - strand at 20.856 kb on + strand at 20.856 kb on + strand at 20.864 kb on - strand at 20.929 kb on - strand at 20.929 kb on - strand at 20.989 kb on - strand at 21.080 kb on + strand, within BWI76_RS00110
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 18,544 - +2.7 18,570 + BWI76_RS00095 0.22 +0.5 18,904 + BWI76_RS00095 0.56 -0.1 19,096 + BWI76_RS00095 0.76 -0.0 19,227 + +0.5 19,300 + +0.5 19,308 - -0.1 19,308 - -0.1 19,313 - -0.1 19,623 - BWI76_RS00100 0.21 +2.8 19,625 - BWI76_RS00100 0.21 +2.9 19,967 + BWI76_RS00100 0.67 +3.5 20,030 + BWI76_RS00100 0.76 +1.3 20,038 - BWI76_RS00100 0.77 +2.1 20,053 - BWI76_RS00100 0.79 +3.8 20,123 + BWI76_RS00100 0.89 +4.4 20,244 - -1.0 20,281 - +2.1 20,314 + BWI76_RS00105 0.12 -0.7 20,322 - BWI76_RS00105 0.14 +0.2 20,350 - BWI76_RS00105 0.19 -0.6 20,436 - BWI76_RS00105 0.34 -0.2 20,467 - BWI76_RS00105 0.39 +0.3 20,495 - BWI76_RS00105 0.44 -1.0 20,502 + BWI76_RS00105 0.46 -0.1 20,588 - BWI76_RS00105 0.61 -1.5 20,715 - BWI76_RS00105 0.83 +1.9 20,806 - +0.8 20,835 - -1.7 20,856 + +0.4 20,856 + -0.2 20,864 - -0.3 20,929 - +0.5 20,929 - -0.4 20,989 - -0.3 21,080 + BWI76_RS00110 0.16 -0.6
Or see this region's nucleotide sequence