Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS18670 and AZOBR_RS18675 are separated by 190 nucleotides
AZOBR_RS18670: AZOBR_RS18670 - guanosine 5'-monophosphate oxidoreductase, at 958,919 to 959,962
_RS18670
AZOBR_RS18675: AZOBR_RS18675 - UDP-galactopyranose mutase, at 960,153 to 961,271
_RS18675
Position (kb) 960
961
962 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 959.154 kb on - strand, within AZOBR_RS18670 at 959.211 kb on - strand, within AZOBR_RS18670 at 959.307 kb on - strand, within AZOBR_RS18670 at 959.720 kb on + strand, within AZOBR_RS18670 at 959.720 kb on + strand, within AZOBR_RS18670 at 959.720 kb on + strand, within AZOBR_RS18670 at 959.753 kb on + strand, within AZOBR_RS18670 at 959.753 kb on + strand, within AZOBR_RS18670 at 959.754 kb on - strand, within AZOBR_RS18670 at 959.754 kb on - strand, within AZOBR_RS18670 at 959.754 kb on - strand, within AZOBR_RS18670 at 959.873 kb on + strand at 959.873 kb on + strand at 959.873 kb on + strand at 959.873 kb on + strand at 959.874 kb on - strand at 959.874 kb on - strand at 959.874 kb on - strand at 959.976 kb on - strand at 959.976 kb on - strand at 959.988 kb on + strand at 960.119 kb on + strand at 960.119 kb on + strand at 960.150 kb on + strand at 960.151 kb on - strand at 960.151 kb on - strand at 960.151 kb on - strand at 960.151 kb on - strand at 960.187 kb on - strand at 960.187 kb on - strand at 960.187 kb on - strand at 960.301 kb on - strand, within AZOBR_RS18675 at 960.384 kb on + strand, within AZOBR_RS18675 at 960.385 kb on - strand, within AZOBR_RS18675 at 960.385 kb on - strand, within AZOBR_RS18675 at 960.385 kb on - strand, within AZOBR_RS18675 at 960.385 kb on - strand, within AZOBR_RS18675 at 960.493 kb on - strand, within AZOBR_RS18675 at 960.493 kb on - strand, within AZOBR_RS18675 at 960.609 kb on + strand, within AZOBR_RS18675 at 960.630 kb on + strand, within AZOBR_RS18675 at 960.631 kb on - strand, within AZOBR_RS18675 at 960.720 kb on + strand, within AZOBR_RS18675 at 960.721 kb on - strand, within AZOBR_RS18675 at 960.721 kb on - strand, within AZOBR_RS18675 at 960.721 kb on - strand, within AZOBR_RS18675 at 960.721 kb on - strand, within AZOBR_RS18675 at 960.885 kb on + strand, within AZOBR_RS18675 at 960.984 kb on + strand, within AZOBR_RS18675 at 961.068 kb on + strand, within AZOBR_RS18675 at 961.069 kb on - strand, within AZOBR_RS18675 at 961.069 kb on - strand, within AZOBR_RS18675 at 961.075 kb on - strand, within AZOBR_RS18675 at 961.098 kb on + strand, within AZOBR_RS18675 at 961.098 kb on + strand, within AZOBR_RS18675 at 961.099 kb on - strand, within AZOBR_RS18675 at 961.101 kb on + strand, within AZOBR_RS18675 at 961.135 kb on - strand, within AZOBR_RS18675 at 961.135 kb on - strand, within AZOBR_RS18675 at 961.144 kb on - strand, within AZOBR_RS18675 at 961.144 kb on - strand, within AZOBR_RS18675 at 961.200 kb on + strand at 961.200 kb on + strand at 961.201 kb on - strand at 961.201 kb on - strand at 961.210 kb on - strand at 961.210 kb on - strand at 961.248 kb on + strand at 961.248 kb on + strand at 961.249 kb on - strand at 961.457 kb on + strand at 961.457 kb on + strand at 961.457 kb on + strand at 961.457 kb on + strand at 961.458 kb on - strand at 961.566 kb on + strand at 961.566 kb on + strand at 961.566 kb on + strand at 961.566 kb on + strand at 961.566 kb on + strand at 961.566 kb on + strand at 961.566 kb on + strand at 961.566 kb on + strand at 961.567 kb on - strand at 961.567 kb on - strand at 961.567 kb on - strand at 961.567 kb on - strand at 961.567 kb on - strand at 961.567 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days remove 959,154 - AZOBR_RS18670 0.23 -1.8 959,211 - AZOBR_RS18670 0.28 +0.5 959,307 - AZOBR_RS18670 0.37 -0.8 959,720 + AZOBR_RS18670 0.77 +0.3 959,720 + AZOBR_RS18670 0.77 -1.8 959,720 + AZOBR_RS18670 0.77 +1.1 959,753 + AZOBR_RS18670 0.80 +0.6 959,753 + AZOBR_RS18670 0.80 +1.0 959,754 - AZOBR_RS18670 0.80 +1.8 959,754 - AZOBR_RS18670 0.80 +0.9 959,754 - AZOBR_RS18670 0.80 +0.2 959,873 + -0.1 959,873 + -0.4 959,873 + +0.1 959,873 + -1.3 959,874 - +0.5 959,874 - -1.7 959,874 - -0.2 959,976 - -0.5 959,976 - -4.1 959,988 + +0.2 960,119 + -0.8 960,119 + +0.4 960,150 + +0.5 960,151 - -0.3 960,151 - -1.8 960,151 - +0.6 960,151 - -0.1 960,187 - +0.7 960,187 - +0.5 960,187 - -0.3 960,301 - AZOBR_RS18675 0.13 +1.6 960,384 + AZOBR_RS18675 0.21 +1.0 960,385 - AZOBR_RS18675 0.21 -0.6 960,385 - AZOBR_RS18675 0.21 +0.1 960,385 - AZOBR_RS18675 0.21 +1.9 960,385 - AZOBR_RS18675 0.21 -1.6 960,493 - AZOBR_RS18675 0.30 -0.8 960,493 - AZOBR_RS18675 0.30 +0.7 960,609 + AZOBR_RS18675 0.41 +0.7 960,630 + AZOBR_RS18675 0.43 -0.2 960,631 - AZOBR_RS18675 0.43 -0.6 960,720 + AZOBR_RS18675 0.51 +0.3 960,721 - AZOBR_RS18675 0.51 +0.4 960,721 - AZOBR_RS18675 0.51 +0.1 960,721 - AZOBR_RS18675 0.51 +1.0 960,721 - AZOBR_RS18675 0.51 +1.5 960,885 + AZOBR_RS18675 0.65 +0.2 960,984 + AZOBR_RS18675 0.74 -0.3 961,068 + AZOBR_RS18675 0.82 -0.5 961,069 - AZOBR_RS18675 0.82 -1.0 961,069 - AZOBR_RS18675 0.82 +0.1 961,075 - AZOBR_RS18675 0.82 +0.2 961,098 + AZOBR_RS18675 0.84 -1.2 961,098 + AZOBR_RS18675 0.84 -2.2 961,099 - AZOBR_RS18675 0.85 -0.2 961,101 + AZOBR_RS18675 0.85 +0.3 961,135 - AZOBR_RS18675 0.88 -0.3 961,135 - AZOBR_RS18675 0.88 +0.9 961,144 - AZOBR_RS18675 0.89 -1.0 961,144 - AZOBR_RS18675 0.89 +0.6 961,200 + -0.4 961,200 + +0.7 961,201 - -1.5 961,201 - +0.7 961,210 - -1.2 961,210 - -0.0 961,248 + +0.9 961,248 + +0.0 961,249 - -2.0 961,457 + +0.9 961,457 + +1.2 961,457 + +0.1 961,457 + +0.8 961,458 - -0.8 961,566 + +0.2 961,566 + +0.2 961,566 + +3.1 961,566 + -0.2 961,566 + +0.3 961,566 + +2.0 961,566 + -0.3 961,566 + +1.2 961,567 - +0.2 961,567 - -1.3 961,567 - +1.4 961,567 - +0.0 961,567 - -0.7 961,567 - +0.9
Or see this region's nucleotide sequence