Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35910

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
3,502,486	+		RR42_RS35905	0.20	-0.7
3,502,486	+		RR42_RS35905	0.20	+0.5
3,502,487	-		RR42_RS35905	0.20	-1.5
3,502,487	-		RR42_RS35905	0.20	-0.4
3,502,487	-		RR42_RS35905	0.20	-0.3
3,502,513	+		RR42_RS35905	0.23	+1.3
3,502,513	+		RR42_RS35905	0.23	-0.6
3,502,514	-		RR42_RS35905	0.23	-0.9
3,502,699	+		RR42_RS35905	0.41	-0.8
3,502,715	+		RR42_RS35905	0.43	+0.7
3,502,715	+		RR42_RS35905	0.43	+0.5
3,502,787	-		RR42_RS35905	0.50	-0.4
3,502,816	+		RR42_RS35905	0.53	-0.4
3,502,817	-		RR42_RS35905	0.53	-0.4
3,502,817	-		RR42_RS35905	0.53	+1.0
3,502,817	-		RR42_RS35905	0.53	-0.2
3,502,939	+		RR42_RS35905	0.65	+0.2
3,502,939	+		RR42_RS35905	0.65	+0.6
3,502,940	-		RR42_RS35905	0.65	-0.2
3,502,990	+		RR42_RS35905	0.70	-1.0
3,502,991	-		RR42_RS35905	0.70	+0.2
3,502,991	-		RR42_RS35905	0.70	+0.2
3,502,991	-		RR42_RS35905	0.70	+0.6
3,502,991	-		RR42_RS35905	0.70	+1.8
3,502,991	-		RR42_RS35905	0.70	+0.4
3,503,173	+		RR42_RS35905	0.88	+0.2
3,503,174	-		RR42_RS35905	0.88	+1.2
3,503,189	-		RR42_RS35905	0.89	-0.0
3,503,189	-		RR42_RS35905	0.89	-1.0
3,503,311	+				-2.0
3,503,312	-				-0.1
3,503,322	-				-0.6
3,503,362	+				-1.5
3,503,370	-				+0.1
3,503,370	-				+0.2
3,503,425	-				+0.1
3,503,463	+				+0.0
3,503,463	+				-0.3
3,503,463	+				-1.1
3,503,463	+				-0.5
3,503,463	+				-0.5
3,503,463	+				-0.8
3,503,463	+				+0.5
3,503,464	-				+0.2
3,503,464	-				+0.1
3,503,464	-				-1.4
3,503,464	-				-0.4
3,503,464	-				+0.0
3,503,464	-				+0.0
3,503,727	+		RR42_RS35910	0.42	-0.5
3,503,727	+		RR42_RS35910	0.42	-0.1
3,503,728	-		RR42_RS35910	0.42	-0.4
3,503,728	-		RR42_RS35910	0.42	+0.2
3,503,728	-		RR42_RS35910	0.42	+0.2
3,503,862	+		RR42_RS35910	0.60	-0.4
3,503,862	+		RR42_RS35910	0.60	-0.1
3,503,862	+		RR42_RS35910	0.60	-0.4
3,503,862	+		RR42_RS35910	0.60	+0.6
3,503,863	-		RR42_RS35910	0.60	-0.1
3,503,863	-		RR42_RS35910	0.60	-0.5
3,503,863	-		RR42_RS35910	0.60	-1.4
3,504,046	-		RR42_RS35910	0.85	-0.1
3,504,046	-		RR42_RS35910	0.85	-1.2
3,504,046	-		RR42_RS35910	0.85	-1.2
3,504,046	-		RR42_RS35910	0.85	-1.5
3,504,159	+				+1.2
3,504,159	+				-0.1
3,504,160	-				-0.2
3,504,160	-				+0.3
3,504,160	-				+0.6
3,504,160	-				-0.7
3,504,287	+				-0.2
3,504,311	+				+0.6
3,504,469	+				-0.4
3,504,469	+				+0.9
3,504,469	+				-0.2
3,504,469	+				-1.0
3,504,469	+				+0.1
3,504,470	-				+0.2
3,504,470	-				-0.6
3,505,060	+		RR42_RS35915	0.57	+0.4
3,505,061	-		RR42_RS35915	0.57	-0.3