Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35755

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
3,467,470	+		RR42_RS35745	0.60	+0.1
3,467,552	+		RR42_RS35745	0.79	-0.8
3,467,552	+		RR42_RS35745	0.79	-0.5
3,467,552	+		RR42_RS35745	0.79	-0.0
3,467,552	+		RR42_RS35745	0.79	-0.6
3,467,552	+		RR42_RS35745	0.79	+0.8
3,467,553	-		RR42_RS35745	0.79	-0.7
3,467,761	-		RR42_RS35750	0.17	+0.5
3,467,774	+		RR42_RS35750	0.19	+1.1
3,467,928	+		RR42_RS35750	0.40	-0.2
3,467,928	+		RR42_RS35750	0.40	-0.9
3,467,928	+		RR42_RS35750	0.40	-0.7
3,467,928	+		RR42_RS35750	0.40	-0.8
3,467,929	-		RR42_RS35750	0.40	+0.1
3,467,929	-		RR42_RS35750	0.40	-0.4
3,467,929	-		RR42_RS35750	0.40	-1.4
3,467,950	-		RR42_RS35750	0.43	-0.9
3,467,950	-		RR42_RS35750	0.43	-1.1
3,467,950	-				+0.1
3,468,156	+		RR42_RS35750	0.72	-1.0
3,468,157	-		RR42_RS35750	0.72	+0.5
3,468,157	-		RR42_RS35750	0.72	+0.2
3,468,349	+				+1.7
3,468,350	-				-0.4
3,468,350	-				+0.5
3,468,351	+				-0.8
3,468,351	+				-0.3
3,468,351	+				-0.6
3,468,351	+				+0.4
3,468,351	+				-0.9
3,468,352	-				-1.1
3,468,376	+				+0.2
3,468,376	+				-1.5
3,468,377	-				-0.7
3,468,616	+		RR42_RS35755	0.28	-0.5
3,468,616	+		RR42_RS35755	0.28	-0.2
3,468,616	+		RR42_RS35755	0.28	-0.2
3,468,713	-		RR42_RS35755	0.41	-0.9
3,468,742	+		RR42_RS35755	0.45	-0.2
3,468,742	+		RR42_RS35755	0.45	-0.8
3,468,743	-		RR42_RS35755	0.45	-1.3
3,468,743	-		RR42_RS35755	0.45	-1.3
3,468,849	-		RR42_RS35755	0.58	+0.4
3,469,220	-				+0.8
3,469,220	-				+0.3
3,469,220	-				+0.9
3,469,220	-				-0.7
3,469,220	-				-0.5
3,469,712	-		RR42_RS35760	0.16	+0.0
3,469,873	+		RR42_RS35760	0.23	-0.9
3,470,040	+		RR42_RS35760	0.30	-0.6
3,470,040	+		RR42_RS35760	0.30	-1.1
3,470,041	-				+0.6