Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33660

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
2,978,532	-		RR42_RS33655	0.24	+1.2
2,978,718	-		RR42_RS33655	0.43	-0.8
2,978,726	+		RR42_RS33655	0.44	+0.5
2,978,727	-		RR42_RS33655	0.44	+0.4
2,978,727	-		RR42_RS33655	0.44	-0.6
2,978,889	-		RR42_RS33655	0.61	-0.2
2,978,936	+		RR42_RS33655	0.66	+0.4
2,978,936	+		RR42_RS33655	0.66	-0.2
2,978,937	-		RR42_RS33655	0.66	-0.2
2,978,937	-		RR42_RS33655	0.66	-1.3
2,978,937	-		RR42_RS33655	0.66	+0.4
2,978,937	-		RR42_RS33655	0.66	+0.2
2,978,937	-		RR42_RS33655	0.66	-0.6
2,979,002	+		RR42_RS33655	0.72	+0.4
2,979,002	+		RR42_RS33655	0.72	+0.1
2,979,002	+		RR42_RS33655	0.72	+0.9
2,979,003	-		RR42_RS33655	0.73	+0.1
2,979,003	-		RR42_RS33655	0.73	+0.1
2,979,003	-		RR42_RS33655	0.73	-0.7
2,979,003	-		RR42_RS33655	0.73	+1.5
2,979,185	+				+0.3
2,979,186	-				-1.2
2,979,242	+				+0.3
2,979,243	-				-0.4
2,979,296	+				+1.0
2,979,742	-		RR42_RS33660	0.45	-1.4
2,979,742	-		RR42_RS33660	0.45	-0.2
2,979,851	-		RR42_RS33660	0.56	+0.1
2,980,155	+		RR42_RS33660	0.88	-0.7
2,980,197	+				+0.5
2,980,197	+				+0.4
2,980,197	+				+1.8
2,980,198	-				+0.5
2,980,267	+				-0.9
2,980,268	-				-1.8
2,980,268	-				-1.1
2,980,280	-				+0.7
2,980,280	-				-0.4
2,980,375	-				+0.3
2,980,385	+				+0.2
2,980,385	+				+0.1
2,980,385	+				+1.8
2,980,385	+				-0.6
2,980,385	+				-0.6
2,980,385	+				-1.4
2,980,385	+				-1.8
2,980,385	+				-0.1
2,980,385	+				-0.3
2,980,385	+				+0.3
2,980,385	+				-0.9
2,980,386	-				+0.2
2,980,386	-				+0.3
2,980,386	-				+0.2
2,980,386	-				+0.9
2,980,386	-				-0.2
2,980,386	-				+0.4
2,980,386	-				-0.1
2,980,386	-				-1.0
2,980,386	-				-1.7
2,980,395	+				-0.3
2,980,395	+				+0.3
2,980,395	+				+1.0
2,980,396	-				+0.4
2,980,396	-				+0.3
2,980,396	-				+0.1
2,980,492	-				+0.4
2,980,494	+				+0.5
2,980,495	-				+1.0
2,980,630	+				-0.0
2,980,630	+				+0.6
2,980,630	+				+0.4
2,980,631	-		RR42_RS33665	0.10	+0.0
2,980,693	-		RR42_RS33665	0.17	-0.9
2,980,946	-		RR42_RS33665	0.45	+1.2
2,981,035	+		RR42_RS33665	0.55	+0.1
2,981,035	+		RR42_RS33665	0.55	+0.8
2,981,035	+		RR42_RS33665	0.55	-0.8
2,981,036	-		RR42_RS33665	0.55	+0.5
2,981,036	-		RR42_RS33665	0.55	+0.4
2,981,036	-		RR42_RS33665	0.55	+0.1
2,981,036	-		RR42_RS33665	0.55	+0.1
2,981,083	+		RR42_RS33665	0.60	-0.0
2,981,083	+		RR42_RS33665	0.60	-0.5
2,981,084	-		RR42_RS33665	0.60	+1.0
2,981,186	-		RR42_RS33665	0.72	+0.2
2,981,186	-		RR42_RS33665	0.72	+1.2
2,981,227	-		RR42_RS33665	0.76	+0.8