Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32995

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
2,803,087	+		RR42_RS32990	0.43	+0.5
2,803,088	-		RR42_RS32990	0.44	-0.4
2,803,088	-		RR42_RS32990	0.44	+0.0
2,803,333	+		RR42_RS32990	0.68	-0.4
2,803,333	+		RR42_RS32990	0.68	-0.5
2,803,333	+		RR42_RS32990	0.68	-0.3
2,803,348	+		RR42_RS32990	0.69	-0.1
2,803,348	+		RR42_RS32990	0.69	-0.2
2,803,492	+		RR42_RS32990	0.83	-2.0
2,803,493	-		RR42_RS32990	0.83	-0.5
2,803,493	-		RR42_RS32990	0.83	-0.3
2,803,493	-		RR42_RS32990	0.83	-0.9
2,803,559	-		RR42_RS32990	0.90	-0.2
2,803,956	+		RR42_RS32995	0.14	-0.8
2,804,251	+		RR42_RS32995	0.72	+0.2
2,804,251	+		RR42_RS32995	0.72	-0.1
2,804,252	-		RR42_RS32995	0.72	-0.2
2,804,318	-		RR42_RS32995	0.85	+0.7
2,804,318	-		RR42_RS32995	0.85	+0.2
2,804,339	+		RR42_RS32995	0.89	+0.8
2,804,339	+		RR42_RS32995	0.89	+0.2
2,804,339	+		RR42_RS32995	0.89	+1.5
2,804,340	-		RR42_RS32995	0.89	+0.7
2,804,340	-		RR42_RS32995	0.89	-0.2
2,804,440	-				+0.4
2,804,536	-				-2.2
2,804,742	+		RR42_RS33000	0.19	-0.1
2,804,742	+		RR42_RS33000	0.19	+0.5
2,804,742	+		RR42_RS33000	0.19	-0.7
2,804,743	-		RR42_RS33000	0.19	+0.1
2,804,774	-		RR42_RS33000	0.21	-0.4
2,804,775	+		RR42_RS33000	0.21	-0.1
2,804,775	+		RR42_RS33000	0.21	-0.5
2,804,775	+		RR42_RS33000	0.21	+0.5
2,804,813	-		RR42_RS33000	0.24	+1.2
2,804,965	-		RR42_RS33000	0.33	-0.7
2,805,210	+		RR42_RS33000	0.49	+0.8
2,805,210	+		RR42_RS33000	0.49	+0.1
2,805,211	-		RR42_RS33000	0.49	-0.7
2,805,211	-		RR42_RS33000	0.49	-0.8
2,805,374	+		RR42_RS33000	0.59	+0.2
2,805,374	+		RR42_RS33000	0.59	+1.4
2,805,375	-		RR42_RS33000	0.59	+1.0