Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32305

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
2,636,289	+		RR42_RS32300	0.44	-0.0
2,636,289	+		RR42_RS32300	0.44	-0.1
2,636,290	-		RR42_RS32300	0.44	-0.1
2,636,567	+		RR42_RS32300	0.70	-0.2
2,636,639	-		RR42_RS32300	0.77	-0.4
2,636,639	-		RR42_RS32300	0.77	-0.6
2,636,639	-		RR42_RS32300	0.77	-0.1
2,636,766	+		RR42_RS32300	0.89	+0.5
2,636,791	+				+0.4
2,636,792	-				-0.9
2,636,858	-				-0.5
2,636,923	+				-0.7
2,636,924	-				-0.4
2,637,026	+				-1.7
2,637,026	+				-0.8
2,637,027	-				+1.0
2,637,027	-				+0.8
2,637,027	-				-1.7
2,637,095	+				-0.8
2,637,096	-				-0.3
2,637,124	+				-1.0
2,637,125	-				-1.3
2,637,125	-				-1.1
2,637,198	+		RR42_RS32305	0.17	-0.4
2,637,198	+		RR42_RS32305	0.17	-0.7
2,637,199	-		RR42_RS32305	0.17	+0.8
2,637,199	-		RR42_RS32305	0.17	-1.0
2,637,199	-		RR42_RS32305	0.17	-0.6
2,637,204	-		RR42_RS32305	0.18	+0.3
2,637,230	-		RR42_RS32305	0.21	-1.0
2,637,230	-		RR42_RS32305	0.21	-0.2
2,637,242	+		RR42_RS32305	0.22	+1.3
2,637,243	-		RR42_RS32305	0.22	+0.8
2,637,243	-		RR42_RS32305	0.22	-1.1
2,637,260	+		RR42_RS32305	0.24	-1.0
2,637,270	-		RR42_RS32305	0.25	+0.2
2,637,278	-		RR42_RS32305	0.26	+1.1
2,637,340	+		RR42_RS32305	0.32	+0.5
2,637,419	-		RR42_RS32305	0.41	-1.1
2,637,551	-		RR42_RS32305	0.55	-0.2
2,637,551	-		RR42_RS32305	0.55	+0.1
2,637,662	+		RR42_RS32305	0.67	-1.3
2,637,843	+		RR42_RS32305	0.87	+0.2
2,637,843	+		RR42_RS32305	0.87	-0.5
2,637,847	+		RR42_RS32305	0.87	-1.5
2,637,848	-		RR42_RS32305	0.87	-0.3
2,637,848	-		RR42_RS32305	0.87	-0.4
2,638,031	+				-0.2
2,638,032	-				+0.2
2,638,032	-				+1.5
2,638,100	+				-1.7
2,638,100	+				-1.7
2,638,309	+		RR42_RS32310	0.55	+0.1
2,638,309	+		RR42_RS32310	0.55	-0.9
2,638,310	-		RR42_RS32310	0.55	-0.9
2,638,310	-		RR42_RS32310	0.55	+0.1
2,638,310	-		RR42_RS32310	0.55	-0.1
2,638,310	-		RR42_RS32310	0.55	-0.3
2,638,310	-		RR42_RS32310	0.55	-0.2
2,638,361	+		RR42_RS32310	0.66	-0.7
2,638,362	-		RR42_RS32310	0.66	-0.7
2,638,493	+				+0.1
2,638,494	-				+0.3
2,638,759	+		RR42_RS32315	0.76	-2.0