Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31730

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
2,495,355	+		RR42_RS31725	0.48	+0.4
2,495,355	+		RR42_RS31725	0.48	-0.4
2,495,355	+		RR42_RS31725	0.48	-0.3
2,495,356	-		RR42_RS31725	0.48	+0.3
2,495,356	-		RR42_RS31725	0.48	-1.0
2,495,356	-		RR42_RS31725	0.48	+0.1
2,495,356	-		RR42_RS31725	0.48	-0.3
2,495,559	-		RR42_RS31725	0.64	-0.8
2,495,559	-		RR42_RS31725	0.64	+0.2
2,495,565	+		RR42_RS31725	0.64	+3.3
2,495,583	+		RR42_RS31725	0.65	+0.3
2,495,719	-		RR42_RS31725	0.76	+0.1
2,495,754	+		RR42_RS31725	0.79	+0.5
2,495,755	-		RR42_RS31725	0.79	+0.3
2,495,851	-		RR42_RS31725	0.86	-0.1
2,496,030	+				-0.1
2,496,030	+				-0.1
2,496,135	+				+0.6
2,496,147	+				+0.3
2,496,148	-				-0.3
2,496,148	-				-1.0
2,496,148	-				-0.2
2,496,212	+		RR42_RS31730	0.15	+1.5
2,496,297	+		RR42_RS31730	0.24	-0.3
2,496,297	+		RR42_RS31730	0.24	+0.8
2,496,297	+		RR42_RS31730	0.24	+0.3
2,496,298	-		RR42_RS31730	0.24	-1.2
2,496,298	-		RR42_RS31730	0.24	+0.6
2,496,344	-		RR42_RS31730	0.29	-0.4
2,496,384	+		RR42_RS31730	0.33	-0.1
2,496,384	+		RR42_RS31730	0.33	-0.5
2,496,384	+				-0.2
2,496,385	-		RR42_RS31730	0.33	+0.2
2,496,427	+		RR42_RS31730	0.37	-0.4
2,496,444	-		RR42_RS31730	0.39	+0.4
2,496,459	+		RR42_RS31730	0.41	-0.0
2,496,459	+		RR42_RS31730	0.41	+0.6
2,496,459	+		RR42_RS31730	0.41	-0.8
2,496,459	+		RR42_RS31730	0.41	-0.3
2,496,460	-		RR42_RS31730	0.41	-1.5
2,496,460	-		RR42_RS31730	0.41	-0.3
2,496,765	+		RR42_RS31730	0.73	+0.0
2,496,766	-		RR42_RS31730	0.73	+0.9
2,497,101	+		RR42_RS31735	0.12	+0.5
2,497,255	-		RR42_RS31735	0.32	-0.8
2,497,255	-		RR42_RS31735	0.32	-0.7
2,497,791	-				+0.8
2,497,849	+		RR42_RS31740	0.12	-1.1
2,497,849	+		RR42_RS31740	0.12	-0.6
2,497,850	-		RR42_RS31740	0.12	+0.8
2,497,850	-		RR42_RS31740	0.12	+0.7
2,497,871	-		RR42_RS31740	0.15	-1.2
2,497,948	-		RR42_RS31740	0.27	+1.0
2,497,948	-		RR42_RS31740	0.27	-0.2