Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31040

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
2,343,786	+		RR42_RS31035	0.27	+0.8
2,343,786	+		RR42_RS31035	0.27	+1.4
2,344,003	+		RR42_RS31035	0.60	-0.0
2,344,004	-		RR42_RS31035	0.60	-0.4
2,344,258	+				-0.7
2,344,291	+				+0.1
2,344,291	+				+0.7
2,344,292	-				+0.5
2,344,292	-				-0.6
2,344,292	-				+0.1
2,344,292	-				+0.3
2,344,292	-				+0.4
2,344,292	-				+0.1
2,344,397	+				+0.6
2,344,397	+				+1.1
2,344,430	+				+0.1
2,344,430	+				-0.8
2,344,430	+				-0.1
2,344,460	-				+0.0
2,344,468	-				+0.2
2,344,709	+				+0.2
2,344,709	+				+0.2
2,344,709	+				+0.2
2,344,709	+				-0.7
2,344,709	+				-0.9
2,344,710	-				+0.5
2,344,710	-				-0.7
2,344,776	+				+0.4
2,344,776	+				-0.9
2,344,776	+				+0.9
2,344,777	-				-0.2
2,344,777	-				+2.5
2,344,871	-		RR42_RS31040	0.37	+0.2
2,344,910	-		RR42_RS31040	0.52	-0.8
2,344,910	-		RR42_RS31040	0.52	-1.2
2,344,910	-		RR42_RS31040	0.52	+0.0
2,344,910	-		RR42_RS31040	0.52	-0.6
2,345,068	-				+0.4
2,345,077	+				-1.7
2,345,077	+				-0.3
2,345,078	-				+0.6
2,345,305	+		RR42_RS31045	0.29	+1.0
2,345,305	+		RR42_RS31045	0.29	-0.3
2,345,305	+		RR42_RS31045	0.29	-0.9
2,345,306	-		RR42_RS31045	0.29	-0.1
2,345,306	-		RR42_RS31045	0.29	+0.2
2,345,343	+		RR42_RS31045	0.33	+0.4
2,345,344	-		RR42_RS31045	0.34	+2.2
2,345,344	-		RR42_RS31045	0.34	-1.1
2,345,611	+		RR42_RS31045	0.65	-0.5
2,345,612	-		RR42_RS31045	0.65	+0.6
2,345,692	+		RR42_RS31045	0.75	-0.1
2,345,692	+		RR42_RS31045	0.75	+0.5
2,345,839	+				-0.4
2,345,840	-				+0.0
2,345,862	-				+1.1
2,345,904	-				-1.7
2,345,904	-				+0.1
2,345,904	-				+1.0
2,345,904	-				-0.2
2,345,922	+				+0.3
2,345,923	-				+0.0
2,345,931	+				-0.3
2,345,932	-				+0.0
2,345,932	-				+0.4
2,345,940	+				+0.6
2,345,940	+				-0.9
2,345,941	-				+0.2
2,345,949	+				-1.9
2,345,959	-				+0.7