Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30735

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
2,272,138	+		RR42_RS30730	0.75	+0.0
2,272,138	+		RR42_RS30730	0.75	+0.4
2,272,139	-		RR42_RS30730	0.75	-0.4
2,272,139	-		RR42_RS30730	0.75	-0.5
2,272,182	+		RR42_RS30730	0.78	+0.8
2,272,300	-		RR42_RS30730	0.87	-0.0
2,272,324	+		RR42_RS30730	0.89	-0.5
2,272,482	+				+0.9
2,272,482	+				+0.0
2,272,483	-				-0.7
2,272,483	-				-0.2
2,272,483	-				+0.2
2,272,652	+				-1.4
2,272,709	+				+0.6
2,272,741	+				-0.5
2,272,741	+				+0.6
2,272,778	+				+0.4
2,272,778	+				+0.2
2,272,778	+				+0.6
2,272,779	-				+0.1
2,272,779	-				-1.2
2,272,779	-				-0.1
2,273,013	+		RR42_RS30735	0.51	-0.7
2,273,058	+				-0.2
2,273,060	+				+0.2
2,273,060	+				-0.2
2,273,060	+				-1.4
2,273,061	-				+0.3
2,273,061	-				+0.1
2,273,089	+				-0.5
2,273,090	-				-0.5
2,273,155	+				+0.4
2,273,155	+				+0.8
2,273,156	-				+0.2
2,273,156	-				-0.3
2,273,156	-				+1.7
2,273,293	+		RR42_RS30740	0.48	-0.1
2,273,294	-		RR42_RS30740	0.48	+0.9
2,273,368	+		RR42_RS30740	0.83	-0.2
2,273,368	+		RR42_RS30740	0.83	-1.3
2,273,368	+		RR42_RS30740	0.83	-2.0
2,273,369	-		RR42_RS30740	0.84	+0.5
2,273,369	-		RR42_RS30740	0.84	+0.2
2,273,369	-		RR42_RS30740	0.84	+1.6
2,273,369	-		RR42_RS30740	0.84	+0.5
2,273,369	-		RR42_RS30740	0.84	+0.0
2,273,372	+		RR42_RS30740	0.85	-0.7
2,273,372	+		RR42_RS30740	0.85	+0.4
2,273,373	-		RR42_RS30740	0.85	+0.6
2,273,373	-		RR42_RS30740	0.85	+0.9
2,273,373	-		RR42_RS30740	0.85	+0.4
2,273,373	-		RR42_RS30740	0.85	-0.5
2,273,381	+		RR42_RS30740	0.89	+0.3
2,273,382	-				-0.9
2,273,453	+				+0.1
2,273,454	-				+0.9
2,273,454	-				-0.4
2,273,454	-				+0.6
2,273,569	-				+0.2
2,273,569	-				+0.7
2,273,582	+				-1.4
2,273,582	+				-0.8
2,273,582	+				+0.5
2,273,625	+				+0.4
2,273,625	+				-0.2
2,273,626	-				-0.0
2,273,626	-				+0.0
2,273,626	-				-0.3
2,273,630	-				+0.0
2,273,635	+				+0.7
2,273,635	+				+0.4
2,273,635	+				+0.0
2,273,638	+				+0.6
2,273,639	-				+0.2
2,273,661	+				+0.4
2,273,662	-				-0.5
2,273,664	+				-1.1
2,273,665	-				-2.2
2,273,665	-				-0.0
2,273,738	+				+0.7
2,273,739	-				+0.3
2,273,798	+				-0.2
2,273,832	+				+0.5
2,273,857	+				+0.3
2,273,857	+				+0.1
2,273,858	-				-0.4
2,273,989	+		RR42_RS30745	0.16	+0.5
2,273,990	-		RR42_RS30745	0.16	+0.0
2,273,990	-		RR42_RS30745	0.16	+0.5
2,273,990	-		RR42_RS30745	0.16	-2.5
2,273,990	-		RR42_RS30745	0.16	+0.4
2,273,990	-		RR42_RS30745	0.16	+0.7