Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30340

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
2,179,579	-		RR42_RS30330	0.45	-1.4
2,179,582	+		RR42_RS30330	0.45	+0.5
2,179,582	+		RR42_RS30330	0.45	+0.4
2,179,582	+		RR42_RS30330	0.45	-1.0
2,179,583	-		RR42_RS30330	0.46	-3.6
2,179,583	-		RR42_RS30330	0.46	-1.2
2,179,748	+		RR42_RS30330	0.72	+0.2
2,179,749	-		RR42_RS30330	0.73	+0.6
2,179,749	-		RR42_RS30330	0.73	-1.0
2,179,809	+		RR42_RS30330	0.82	-1.5
2,179,809	+		RR42_RS30330	0.82	+0.1
2,179,810	-		RR42_RS30330	0.82	-1.1
2,179,868	-				+0.1
2,179,868	-				-0.8
2,180,098	+		RR42_RS30335	0.21	-0.2
2,180,099	-		RR42_RS30335	0.21	-0.3
2,180,202	+		RR42_RS30335	0.38	+1.5
2,180,202	+		RR42_RS30335	0.38	-0.4
2,180,203	-		RR42_RS30335	0.38	+0.9
2,180,249	+		RR42_RS30335	0.46	-0.1
2,180,249	+		RR42_RS30335	0.46	-0.3
2,180,250	-		RR42_RS30335	0.46	+0.2
2,180,250	-		RR42_RS30335	0.46	-0.2
2,180,250	-		RR42_RS30335	0.46	-0.7
2,180,250	-		RR42_RS30335	0.46	-0.2
2,180,250	-		RR42_RS30335	0.46	-0.2
2,180,541	+				-0.3
2,180,542	-				-0.0
2,180,603	+				-0.0
2,180,603	+				-0.9
2,180,604	-				+0.3
2,180,604	-				-0.4
2,180,604	-				+0.6
2,180,604	-				+0.4
2,180,787	+		RR42_RS30340	0.26	-0.5
2,180,904	+		RR42_RS30340	0.41	-1.2
2,181,035	-		RR42_RS30340	0.57	-1.0
2,181,465	-				+0.3
2,181,465	-				+0.9
2,181,560	-		RR42_RS30345	0.21	-0.4
2,181,848	+		RR42_RS30345	0.64	+0.5
2,181,962	-		RR42_RS30345	0.81	-0.6
2,181,990	+		RR42_RS30345	0.85	-0.7
2,181,990	+		RR42_RS30345	0.85	-1.4
2,181,990	+		RR42_RS30345	0.85	-0.1
2,181,991	-		RR42_RS30345	0.85	+0.2
2,181,991	-		RR42_RS30345	0.85	+1.0
2,182,006	-		RR42_RS30345	0.88	+1.4
2,182,168	-				+0.0
2,182,335	+		RR42_RS30350	0.19	-1.4
2,182,336	-		RR42_RS30350	0.19	+0.3