Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28605

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
1,772,526	+		RR42_RS28595	0.90	+0.3
1,772,554	+				-1.0
1,772,554	+				-0.1
1,772,554	+				+0.2
1,772,555	-				-0.3
1,772,629	+				-0.2
1,772,629	+				+0.4
1,772,629	+				+0.6
1,772,630	-				-0.1
1,772,630	-				+0.6
1,772,630	-				-1.0
1,772,630	-				+0.5
1,772,630	-				-1.4
1,772,633	-				-0.2
1,772,633	-				-0.8
1,772,659	+				+0.7
1,772,660	-				-1.0
1,772,660	-				-0.3
1,772,719	+				-0.9
1,772,719	+				-0.2
1,772,748	+				-0.9
1,772,748	+				+1.1
1,772,799	+				+1.2
1,772,830	+		RR42_RS28600	0.15	-0.1
1,772,831	-		RR42_RS28600	0.15	+0.9
1,772,893	+		RR42_RS28600	0.29	-1.7
1,772,894	-		RR42_RS28600	0.29	+0.2
1,772,986	+		RR42_RS28600	0.49	+1.5
1,772,987	-		RR42_RS28600	0.49	+0.2
1,772,987	-		RR42_RS28600	0.49	-0.9
1,773,036	-		RR42_RS28600	0.60	+0.3
1,773,179	+				+0.6
1,773,180	-				+0.3
1,773,390	+				-0.8
1,773,390	+				+0.3
1,773,390	+				+0.7
1,773,390	+				-0.2
1,773,390	+				-0.6
1,773,390	+				-0.5
1,773,390	+				-0.1
1,773,391	-				+1.1
1,773,391	-				+0.1
1,773,391	-				+0.1
1,773,391	-				-0.2
1,773,391	-				-0.7
1,773,391	-				+1.0
1,773,393	-				-0.7
1,773,393	-				-0.1
1,773,393	-				+0.0
1,773,393	-				+0.9
1,773,393	-				+0.0
1,773,393	-				+0.2
1,773,477	+				-2.9
1,774,098	+		RR42_RS28605	0.40	-0.6
1,774,099	-		RR42_RS28605	0.40	+0.1
1,774,099	-		RR42_RS28605	0.40	-0.9
1,774,099	-		RR42_RS28605	0.40	+0.8
1,774,299	+		RR42_RS28605	0.54	+0.5
1,774,300	-		RR42_RS28605	0.54	-0.3
1,774,431	+		RR42_RS28605	0.63	+0.5
1,774,432	-		RR42_RS28605	0.63	-0.3
1,774,568	+		RR42_RS28605	0.72	-0.2
1,774,568	+		RR42_RS28605	0.72	-0.6
1,774,569	-		RR42_RS28605	0.72	-0.6
1,774,569	-		RR42_RS28605	0.72	-0.2
1,774,569	-		RR42_RS28605	0.72	-0.8
1,774,654	-		RR42_RS28605	0.78	+0.1
1,774,721	+		RR42_RS28605	0.83	-0.1
1,774,722	-		RR42_RS28605	0.83	+0.1
1,774,758	+		RR42_RS28605	0.85	-1.2
1,774,791	+		RR42_RS28605	0.88	+1.6
1,774,815	+		RR42_RS28605	0.89	+0.1
1,775,116	+		RR42_RS28610	0.11	-1.9
1,775,435	-		RR42_RS28610	0.36	-0.0
1,775,435	-		RR42_RS28610	0.36	-0.4
1,775,719	+		RR42_RS28610	0.58	-0.2
1,775,720	-		RR42_RS28610	0.58	-0.7
1,775,720	-		RR42_RS28610	0.58	-0.3
1,775,949	-		RR42_RS28610	0.76	-1.2