Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28195

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
1,681,139	+		RR42_RS28185	0.80	-0.7
1,681,140	-		RR42_RS28185	0.80	+0.2
1,681,140	-		RR42_RS28185	0.80	-1.2
1,681,320	-				+0.2
1,681,320	-				-0.1
1,681,320	-				+0.9
1,681,322	+				+0.2
1,681,322	+				+0.2
1,681,323	-				+1.1
1,681,464	+				-0.1
1,681,852	+		RR42_RS28190	0.79	+0.3
1,681,878	+		RR42_RS28190	0.84	-1.5
1,681,928	+				-1.0
1,681,928	+				+0.4
1,681,928	+				-0.5
1,681,929	-				+0.2
1,681,935	-				+0.3
1,681,982	+				+0.7
1,681,982	+				+0.6
1,681,982	+				+0.6
1,681,982	+				+0.9
1,681,982	+				-0.4
1,681,983	-				-1.0
1,681,983	-				-0.4
1,682,701	-		RR42_RS28195	0.78	-0.8
1,682,798	+		RR42_RS28195	0.89	-0.7
1,682,799	+		RR42_RS28195	0.89	-0.5
1,682,799	+		RR42_RS28195	0.89	-0.2
1,682,908	+				+0.3
1,682,909	-				+0.8
1,683,121	+		RR42_RS28200	0.44	+0.9
1,683,156	-		RR42_RS28200	0.51	+0.6
1,683,285	+		RR42_RS28200	0.76	+0.2
1,683,285	+		RR42_RS28200	0.76	-0.4
1,683,286	-		RR42_RS28200	0.76	+0.6
1,683,315	+		RR42_RS28200	0.81	-0.5
1,683,316	-		RR42_RS28200	0.82	-0.3
1,683,352	+		RR42_RS28200	0.89	-0.2
1,683,503	+				-0.4
1,683,504	-				-0.8
1,683,508	+				-0.3
1,683,510	+				+0.0
1,683,511	-				-0.6
1,683,549	+				+0.2
1,683,580	-				-0.5
1,683,688	-				-0.1
1,683,751	+				-1.0
1,683,751	+				-1.1
1,683,769	+				+1.6
1,683,822	+		RR42_RS28205	0.11	-1.0
1,683,880	+		RR42_RS28205	0.14	+0.6