Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27095
Experiment: R2A with Cephalothin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Cephalothin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,431,138 | + | +0.3 | |||
1,431,139 | - | +0.1 | |||
1,431,139 | - | -0.1 | |||
1,431,139 | - | +0.2 | |||
1,431,139 | - | -0.3 | |||
1,431,348 | - | +1.7 | |||
1,431,523 | - | +0.6 | |||
1,431,529 | - | +0.0 | |||
1,431,529 | - | +0.1 | |||
1,432,151 | + | RR42_RS27095 | 0.38 | +0.5 | |
1,432,447 | + | RR42_RS27095 | 0.73 | +1.0 | |
1,432,693 | + | -0.1 | |||
1,432,839 | + | +0.9 | |||
1,433,231 | + | RR42_RS27100 | 0.25 | +0.2 | |
1,433,282 | - | RR42_RS27100 | 0.27 | -1.2 | |
1,433,282 | - | RR42_RS27100 | 0.27 | +0.1 | |
1,433,282 | - | RR42_RS27100 | 0.27 | -1.6 | |
1,433,282 | - | RR42_RS27100 | 0.27 | -1.0 |
Or see this region's nucleotide sequence