Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20035

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
4,327,082	-		RR42_RS20030	0.16	+0.7
4,327,082	-		RR42_RS20030	0.16	-0.9
4,327,409	-		RR42_RS20030	0.44	-1.2
4,327,409	-		RR42_RS20030	0.44	-0.7
4,327,409	-		RR42_RS20030	0.44	-0.5
4,327,660	+		RR42_RS20030	0.66	-0.8
4,327,726	+		RR42_RS20030	0.72	-0.6
4,327,726	+		RR42_RS20030	0.72	+2.1
4,327,727	-		RR42_RS20030	0.72	-1.3
4,327,859	-		RR42_RS20030	0.84	-0.1
4,327,859	-		RR42_RS20030	0.84	-1.5
4,327,859	-		RR42_RS20030	0.84	-0.8
4,328,228	+		RR42_RS20035	0.14	-0.0
4,328,537	+		RR42_RS20035	0.41	+0.8
4,328,537	+		RR42_RS20035	0.41	+0.2
4,328,537	+		RR42_RS20035	0.41	+0.8
4,328,538	-		RR42_RS20035	0.41	-1.5
4,328,538	-		RR42_RS20035	0.41	-1.1
4,328,538	-		RR42_RS20035	0.41	-0.6
4,328,540	+		RR42_RS20035	0.42	+0.8
4,328,540	+		RR42_RS20035	0.42	-0.6
4,328,540	+		RR42_RS20035	0.42	-0.8
4,328,540	+		RR42_RS20035	0.42	-1.1
4,328,541	-		RR42_RS20035	0.42	-0.7
4,329,116	-				-0.1
4,329,255	+				+0.3
4,329,255	+				-0.5
4,329,255	+				-0.3
4,329,255	+				-0.2
4,329,255	+				+0.5
4,329,255	+				-0.2
4,329,256	-				-0.8
4,329,256	-				+0.1
4,329,274	+				-0.7
4,329,427	+		RR42_RS20040	0.27	-0.6
4,329,428	-		RR42_RS20040	0.27	-0.2
4,329,645	+		RR42_RS20040	0.57	-1.2
4,329,645	+		RR42_RS20040	0.57	-0.0
4,329,646	-		RR42_RS20040	0.57	+0.1
4,329,646	-		RR42_RS20040	0.57	-0.0
4,329,646	-		RR42_RS20040	0.57	+0.4
4,329,646	-		RR42_RS20040	0.57	-2.0
4,329,802	-		RR42_RS20040	0.79	-0.3
4,329,875	+		RR42_RS20040	0.89	+0.6
4,329,875	+		RR42_RS20040	0.89	-0.7
4,329,875	+		RR42_RS20040	0.89	+0.1
4,329,875	+		RR42_RS20040	0.89	+1.0
4,329,876	-		RR42_RS20040	0.89	+0.4
4,329,876	-		RR42_RS20040	0.89	-0.9
4,329,879	+		RR42_RS20040	0.89	+0.2
4,329,879	+		RR42_RS20040	0.89	-0.8
4,329,879	+		RR42_RS20040	0.89	+0.7
4,329,880	-		RR42_RS20040	0.89	-0.2
4,329,880	-		RR42_RS20040	0.89	+0.6
4,330,094	+				-0.3
4,330,094	+				-0.1
4,330,095	+				+0.2
4,330,152	+				+0.1
4,330,152	+				-0.2
4,330,153	-				+0.0
4,330,183	+				-0.8
4,330,183	+				+0.5
4,330,183	+				+1.5
4,330,183	+				+0.5
4,330,183	+				-0.6
4,330,183	+				-0.7
4,330,184	-				-1.2