Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19915

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
4,300,273	+		RR42_RS19910	0.38	+0.2
4,300,274	-		RR42_RS19910	0.38	-1.4
4,300,274	-		RR42_RS19910	0.38	+0.2
4,300,339	+		RR42_RS19910	0.42	-0.2
4,300,636	+		RR42_RS19910	0.61	-2.4
4,300,636	+		RR42_RS19910	0.61	+0.6
4,300,637	-		RR42_RS19910	0.61	-1.7
4,300,792	+		RR42_RS19910	0.72	+0.0
4,300,792	+		RR42_RS19910	0.72	+0.5
4,300,810	+		RR42_RS19910	0.73	-0.8
4,300,811	-		RR42_RS19910	0.73	-0.3
4,300,909	+		RR42_RS19910	0.79	-0.9
4,300,909	+		RR42_RS19910	0.79	+0.1
4,300,910	-		RR42_RS19910	0.79	-0.4
4,300,910	-		RR42_RS19910	0.79	-0.7
4,300,910	-		RR42_RS19910	0.79	+0.2
4,300,963	+		RR42_RS19910	0.83	-0.1
4,300,964	-		RR42_RS19910	0.83	+2.7
4,301,068	+		RR42_RS19910	0.90	-1.5
4,301,069	-		RR42_RS19910	0.90	-0.4
4,301,226	+				-0.4
4,301,234	-				+1.7
4,301,542	+		RR42_RS19915	0.29	-1.1
4,301,543	-		RR42_RS19915	0.29	-0.5
4,301,562	-		RR42_RS19915	0.31	-0.8
4,301,586	-		RR42_RS19915	0.33	-0.8
4,301,646	-		RR42_RS19915	0.39	+1.2
4,301,662	+		RR42_RS19915	0.40	-1.8
4,301,743	-		RR42_RS19915	0.48	-0.6
4,301,822	-		RR42_RS19915	0.56	+0.0
4,301,851	+		RR42_RS19915	0.59	-0.0
4,301,851	+		RR42_RS19915	0.59	-0.3
4,301,851	+		RR42_RS19915	0.59	-0.4
4,301,852	-		RR42_RS19915	0.59	+0.4
4,301,878	+		RR42_RS19915	0.61	-0.2
4,301,884	+		RR42_RS19915	0.62	-0.7
4,301,884	+		RR42_RS19915	0.62	+0.0
4,301,885	-		RR42_RS19915	0.62	-1.7
4,301,992	+		RR42_RS19915	0.72	+0.6
4,301,992	+		RR42_RS19915	0.72	+0.4
4,301,992	+		RR42_RS19915	0.72	-0.4
4,301,993	-		RR42_RS19915	0.72	+0.4
4,301,993	-		RR42_RS19915	0.72	-0.3
4,301,993	-		RR42_RS19915	0.72	+0.6
4,302,044	-		RR42_RS19915	0.77	-0.4
4,302,044	-		RR42_RS19915	0.77	-0.4
4,302,194	-				-2.4
4,302,208	-				-0.3
4,302,245	+				-0.2
4,302,246	-				-0.4
4,302,367	+		RR42_RS19920	0.11	-1.7
4,302,394	+		RR42_RS19920	0.18	-1.0
4,302,637	-		RR42_RS19920	0.81	-1.2
4,302,637	-		RR42_RS19920	0.81	-0.7
4,302,637	-		RR42_RS19920	0.81	-0.9
4,302,690	+				-0.3
4,302,690	+				-0.0
4,302,696	+				-0.5
4,302,696	+				+0.0
4,302,697	-				-0.2
4,302,697	-				-0.2
4,302,768	+				-0.7
4,302,768	+				-0.6
4,302,802	-				-0.4
4,302,840	+				+0.3
4,302,841	-				-0.6
4,302,841	-				+0.4
4,302,841	-				+0.7
4,302,842	+				-0.3
4,303,085	+				-0.9
4,303,085	+				-0.1
4,303,085	+				+0.7
4,303,086	-				-0.7
4,303,086	-				-2.2
4,303,086	-				-1.6
4,303,134	-				+0.3
4,303,173	-		RR42_RS19925	0.12	+0.0