Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18300

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
3,963,827	+		RR42_RS18295	0.42	+0.7
3,963,851	+		RR42_RS18295	0.44	-1.1
3,963,881	+		RR42_RS18295	0.46	-0.3
3,963,881	+		RR42_RS18295	0.46	-0.5
3,963,882	-		RR42_RS18295	0.46	-0.0
3,963,882	-		RR42_RS18295	0.46	+1.3
3,963,882	-		RR42_RS18295	0.46	-0.5
3,963,962	+		RR42_RS18295	0.51	-0.7
3,963,995	+		RR42_RS18295	0.54	-0.7
3,963,995	+		RR42_RS18295	0.54	-1.3
3,963,995	+		RR42_RS18295	0.54	-1.1
3,963,996	-		RR42_RS18295	0.54	-0.9
3,963,996	-		RR42_RS18295	0.54	-0.2
3,963,996	-		RR42_RS18295	0.54	-0.7
3,963,996	-		RR42_RS18295	0.54	-0.3
3,963,996	-		RR42_RS18295	0.54	-0.3
3,964,001	+		RR42_RS18295	0.54	-1.5
3,964,001	+		RR42_RS18295	0.54	-0.7
3,964,001	+		RR42_RS18295	0.54	-0.4
3,964,001	+		RR42_RS18295	0.54	-0.5
3,964,002	-		RR42_RS18295	0.54	-0.7
3,964,002	-		RR42_RS18295	0.54	-2.1
3,964,002	-		RR42_RS18295	0.54	-1.5
3,964,002	-		RR42_RS18295	0.54	-1.7
3,964,002	-		RR42_RS18295	0.54	-1.8
3,964,007	+		RR42_RS18295	0.54	-0.8
3,964,310	+		RR42_RS18295	0.74	+0.3
3,964,310	+		RR42_RS18295	0.74	-0.2
3,964,310	+		RR42_RS18295	0.74	+0.4
3,964,310	+		RR42_RS18295	0.74	-2.1
3,964,311	-		RR42_RS18295	0.74	-1.9
3,964,479	-		RR42_RS18295	0.85	-0.3
3,964,496	+		RR42_RS18295	0.87	-1.4
3,964,497	-		RR42_RS18295	0.87	-0.4
3,964,568	+				-1.0
3,964,568	+				-1.5
3,964,569	-				-0.4
3,964,569	-				+0.3
3,964,569	-				-3.4
3,964,569	-				-0.3
3,964,694	-				-0.2
3,964,697	+				-0.5
3,964,697	+				+0.4
3,964,697	+				+0.1
3,964,697	+				+2.3
3,964,697	+				-0.2
3,964,697	+				+0.0
3,964,697	+				+0.8
3,964,698	-				-0.0
3,964,698	-				-0.8
3,964,698	-				-0.7
3,964,698	-				-1.1
3,964,703	-				+0.2
3,964,745	+				-0.9
3,964,746	-				+0.9
3,964,746	-				-1.2
3,964,761	-				-0.1
3,964,861	+		RR42_RS18300	0.24	-1.9
3,964,861	+		RR42_RS18300	0.24	+0.3
3,964,861	+		RR42_RS18300	0.24	+0.7
3,964,861	+		RR42_RS18300	0.24	+1.0
3,964,861	+		RR42_RS18300	0.24	-1.1
3,964,862	-		RR42_RS18300	0.24	-1.3
3,964,862	-		RR42_RS18300	0.24	-2.7
3,965,103	-		RR42_RS18300	0.66	-2.3
3,965,901	+		RR42_RS18305	0.52	-1.3
3,965,902	-		RR42_RS18305	0.52	-1.3
3,965,902	-		RR42_RS18305	0.52	-1.2
3,966,028	+		RR42_RS18305	0.65	-0.7