Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17840

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
3,858,369	-		RR42_RS17835	0.66	-0.4
3,858,369	-		RR42_RS17835	0.66	+1.1
3,858,617	+		RR42_RS17835	0.77	-0.3
3,858,618	-		RR42_RS17835	0.77	+0.2
3,858,618	-		RR42_RS17835	0.77	+1.3
3,858,630	-		RR42_RS17835	0.77	+0.6
3,858,704	+		RR42_RS17835	0.80	-0.4
3,858,704	+		RR42_RS17835	0.80	-0.1
3,858,704	+		RR42_RS17835	0.80	+0.7
3,858,704	+		RR42_RS17835	0.80	+0.0
3,858,705	-		RR42_RS17835	0.80	-0.1
3,858,705	-		RR42_RS17835	0.80	-1.1
3,858,705	-		RR42_RS17835	0.80	-2.2
3,858,776	+		RR42_RS17835	0.83	-0.3
3,858,777	-		RR42_RS17835	0.83	-0.3
3,859,161	+				+0.6
3,859,161	+				+0.1
3,859,162	-				-1.1
3,859,162	-				-0.4
3,859,164	-				-0.9
3,859,381	+				-0.3
3,859,381	+				+0.1
3,859,382	-				+0.0
3,859,429	+				+0.4
3,859,453	+		RR42_RS17840	0.11	+0.2
3,859,598	+		RR42_RS17840	0.27	-0.1
3,859,600	+		RR42_RS17840	0.27	-0.7
3,859,600	+		RR42_RS17840	0.27	-0.0
3,859,601	-		RR42_RS17840	0.27	-0.3
3,859,601	-		RR42_RS17840	0.27	-0.1
3,859,658	+		RR42_RS17840	0.33	+0.3
3,859,681	+		RR42_RS17840	0.36	-0.7
3,859,741	+		RR42_RS17840	0.42	+1.3
3,859,741	+		RR42_RS17840	0.42	+0.2
3,859,742	-		RR42_RS17840	0.43	+0.1
3,859,742	-		RR42_RS17840	0.43	-1.1
3,859,900	+		RR42_RS17840	0.60	-0.1
3,860,050	+		RR42_RS17840	0.76	-0.5
3,860,050	+		RR42_RS17840	0.76	+0.2
3,860,050	+		RR42_RS17840	0.76	+0.2
3,860,056	+		RR42_RS17840	0.77	-0.2
3,860,056	+		RR42_RS17840	0.77	-1.0
3,860,057	-		RR42_RS17840	0.77	-1.7
3,860,057	-		RR42_RS17840	0.77	-0.2
3,860,057	-		RR42_RS17840	0.77	-0.2
3,860,300	+				+0.1
3,860,301	-				-0.2
3,860,307	+				-0.8
3,860,308	-				-1.3
3,860,417	+				-0.9
3,860,417	+				+0.4
3,860,418	-				+0.0
3,860,418	-				-0.2
3,860,471	-				-1.2
3,860,471	-				-0.7
3,860,471	-				-0.6
3,860,525	+		RR42_RS17845	0.14	-0.9
3,860,526	-		RR42_RS17845	0.14	+1.4
3,860,667	-		RR42_RS17845	0.29	+0.6
3,861,052	+		RR42_RS17845	0.71	+2.1
3,861,052	+		RR42_RS17845	0.71	-1.5
3,861,052	+		RR42_RS17845	0.71	+0.1
3,861,053	-		RR42_RS17845	0.71	+0.6
3,861,053	-		RR42_RS17845	0.71	-0.4
3,861,084	-		RR42_RS17845	0.75	-0.5
3,861,106	+		RR42_RS17845	0.77	+1.5
3,861,106	+		RR42_RS17845	0.77	-0.7
3,861,107	-		RR42_RS17845	0.77	+0.9
3,861,107	-		RR42_RS17845	0.77	-0.2
3,861,107	-		RR42_RS17845	0.77	-1.1