Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16995

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
3,678,115	-		RR42_RS16990	0.22	-0.2
3,678,503	-				-1.2
3,678,503	-				-0.5
3,678,503	-				-0.7
3,678,522	-				-0.1
3,678,529	-				+1.3
3,678,533	+				+0.0
3,678,534	-				-0.5
3,678,534	-				-0.1
3,678,534	-				+0.6
3,678,601	+				-0.8
3,678,827	+		RR42_RS16995	0.35	-1.4
3,678,827	+		RR42_RS16995	0.35	-0.6
3,678,827	+		RR42_RS16995	0.35	+0.1
3,678,827	+		RR42_RS16995	0.35	+0.0
3,678,827	+		RR42_RS16995	0.35	-0.3
3,678,827	+		RR42_RS16995	0.35	+0.4
3,678,827	+		RR42_RS16995	0.35	-0.2
3,678,828	-		RR42_RS16995	0.35	+0.4
3,678,828	-		RR42_RS16995	0.35	-0.4
3,678,828	-		RR42_RS16995	0.35	-0.3
3,678,828	-		RR42_RS16995	0.35	+0.5
3,678,828	-		RR42_RS16995	0.35	-0.5
3,678,926	+		RR42_RS16995	0.49	-0.5
3,678,927	-		RR42_RS16995	0.49	-1.2
3,678,956	+		RR42_RS16995	0.54	-0.8
3,678,956	+		RR42_RS16995	0.54	+0.3
3,678,956	+		RR42_RS16995	0.54	+0.2
3,678,956	+		RR42_RS16995	0.54	-0.5
3,678,956	+		RR42_RS16995	0.54	-0.1
3,678,957	-		RR42_RS16995	0.54	+0.8
3,678,957	-		RR42_RS16995	0.54	+0.2
3,678,957	-		RR42_RS16995	0.54	-1.0
3,678,957	-		RR42_RS16995	0.54	-0.7
3,679,082	+		RR42_RS16995	0.72	-0.3
3,679,082	+		RR42_RS16995	0.72	-0.1
3,679,082	+		RR42_RS16995	0.72	-0.5
3,679,082	+		RR42_RS16995	0.72	+0.1
3,679,083	-		RR42_RS16995	0.73	-0.1
3,679,083	-		RR42_RS16995	0.73	-1.2
3,679,229	-				-0.5
3,679,231	+				-0.7
3,679,232	-				+0.1
3,679,883	+				-0.5
3,679,883	+				-2.1
3,679,884	-				-0.1
3,679,969	+				-0.3
3,679,969	+				-0.0
3,679,969	+				+0.0
3,680,049	+				-0.1
3,680,050	-				-1.4
3,680,242	-				+0.8