Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16865

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
3,647,239	+				-0.1
3,647,258	-				-0.5
3,647,354	+				-0.7
3,647,552	+				+0.4
3,647,552	+				+0.4
3,647,608	-				+0.3
3,647,652	-				+0.6
3,647,721	-				-0.5
3,647,721	-				-0.1
3,647,790	+				+0.2
3,647,866	+		RR42_RS16860	0.27	+0.2
3,647,867	-		RR42_RS16860	0.27	+1.2
3,647,867	-		RR42_RS16860	0.27	+0.3
3,647,867	-		RR42_RS16860	0.27	-0.1
3,647,867	-		RR42_RS16860	0.27	+0.4
3,647,935	+		RR42_RS16860	0.43	+0.4
3,647,936	-		RR42_RS16860	0.43	-0.6
3,647,983	+		RR42_RS16860	0.54	-1.0
3,648,017	-		RR42_RS16860	0.62	+0.4
3,648,058	+		RR42_RS16860	0.71	-0.7
3,648,059	-		RR42_RS16860	0.72	-0.8
3,648,059	-		RR42_RS16860	0.72	-0.2
3,648,120	+		RR42_RS16860	0.86	-0.0
3,648,120	+		RR42_RS16860	0.86	-1.5
3,648,120	+		RR42_RS16860	0.86	-0.6
3,648,178	+				-1.7
3,648,179	-				-0.1
3,648,269	+		RR42_RS16865	0.17	-0.1
3,648,337	-		RR42_RS16865	0.31	-0.2
3,648,609	+		RR42_RS16865	0.87	+0.1
3,648,609	+		RR42_RS16865	0.87	-0.4
3,648,610	-		RR42_RS16865	0.87	-0.1
3,648,610	-		RR42_RS16865	0.87	-0.0
3,648,828	+		RR42_RS16870	0.27	+0.3
3,648,829	-		RR42_RS16870	0.27	+0.2
3,648,857	-		RR42_RS16870	0.32	+0.0
3,648,857	-		RR42_RS16870	0.32	+1.1
3,648,906	+		RR42_RS16870	0.40	-1.0
3,648,907	-		RR42_RS16870	0.40	+0.3
3,648,907	-		RR42_RS16870	0.40	-0.2
3,648,907	-		RR42_RS16870	0.40	+0.2
3,649,094	+		RR42_RS16870	0.72	-0.3
3,649,095	-		RR42_RS16870	0.72	-0.5
3,649,125	+		RR42_RS16870	0.77	-0.4
3,649,125	+		RR42_RS16870	0.77	+0.5
3,649,126	-		RR42_RS16870	0.77	-0.1
3,649,225	+				-0.2
3,649,238	-				+0.1
3,649,238	-				+0.9
3,649,367	+				-1.0
3,649,434	-		RR42_RS16875	0.15	-0.4
3,649,498	+		RR42_RS16875	0.22	-0.8
3,649,498	+		RR42_RS16875	0.22	+0.6
3,649,498	+		RR42_RS16875	0.22	-0.7
3,649,498	+		RR42_RS16875	0.22	-0.3