Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15190

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
3,289,294	-		RR42_RS15185	0.47	+0.3
3,289,551	+		RR42_RS15185	0.75	+0.5
3,289,551	+		RR42_RS15185	0.75	-0.6
3,289,559	+		RR42_RS15185	0.76	+0.3
3,289,834	+				-0.5
3,289,834	+				-0.5
3,289,835	-				-0.3
3,289,835	-				+0.4
3,289,856	+				+0.4
3,289,870	-				-2.1
3,289,873	+				+0.6
3,289,916	-				-0.1
3,289,916	-				-1.0
3,289,934	+				-0.3
3,289,934	+				+1.0
3,290,118	+				-1.8
3,290,118	+				-0.4
3,290,346	+		RR42_RS15190	0.32	-1.6
3,290,346	+		RR42_RS15190	0.32	+0.2
3,290,347	-		RR42_RS15190	0.32	+0.7
3,290,347	-		RR42_RS15190	0.32	+1.0
3,290,368	-		RR42_RS15190	0.34	-0.7
3,290,368	-		RR42_RS15190	0.34	-1.5
3,290,505	+		RR42_RS15190	0.48	-0.5
3,290,506	-		RR42_RS15190	0.48	-1.1
3,290,805	+		RR42_RS15190	0.79	+0.2
3,290,805	+		RR42_RS15190	0.79	-0.7
3,290,805	+		RR42_RS15190	0.79	-1.0
3,290,806	-		RR42_RS15190	0.79	-0.5
3,290,806	-		RR42_RS15190	0.79	-0.1
3,290,806	-		RR42_RS15190	0.79	-0.6
3,291,012	+				-0.2
3,291,013	-				-1.4
3,291,017	+				-0.2
3,291,017	+				+0.0
3,291,017	+				-1.9
3,291,018	-				-1.5
3,291,018	-				+0.4
3,291,018	-				-1.5
3,291,370	+		RR42_RS15195	0.18	+0.5
3,291,370	+		RR42_RS15195	0.18	+0.8
3,291,385	+		RR42_RS15195	0.18	-0.5
3,291,548	-		RR42_RS15195	0.28	-0.1
3,291,548	-		RR42_RS15195	0.28	-0.2
3,291,616	+		RR42_RS15195	0.33	+0.8
3,291,730	+		RR42_RS15195	0.40	+0.3
3,291,730	+		RR42_RS15195	0.40	-0.3
3,291,731	-		RR42_RS15195	0.40	+0.9
3,291,731	-		RR42_RS15195	0.40	+0.2
3,291,811	+		RR42_RS15195	0.45	+0.2
3,291,811	+		RR42_RS15195	0.45	+0.8
3,291,811	+		RR42_RS15195	0.45	-0.0
3,291,811	+		RR42_RS15195	0.45	+0.3
3,292,013	-		RR42_RS15195	0.57	-0.5