Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14530

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
3,126,674	+		RR42_RS14525	0.32	+0.1
3,126,730	-		RR42_RS14525	0.37	+0.2
3,126,776	-		RR42_RS14525	0.41	-1.2
3,126,825	-		RR42_RS14525	0.46	+0.1
3,126,825	-		RR42_RS14525	0.46	+1.5
3,126,836	-		RR42_RS14525	0.47	-0.7
3,126,950	+		RR42_RS14525	0.57	+0.2
3,126,988	+		RR42_RS14525	0.60	-0.2
3,126,989	-		RR42_RS14525	0.60	+0.6
3,127,032	-		RR42_RS14525	0.64	-0.4
3,127,048	+		RR42_RS14525	0.65	-0.0
3,127,049	-		RR42_RS14525	0.65	+0.6
3,127,091	-		RR42_RS14525	0.69	+0.4
3,127,174	+		RR42_RS14525	0.76	+0.7
3,127,458	-				-0.5
3,127,507	-				-0.5
3,127,644	+		RR42_RS14530	0.23	-1.1
3,127,644	+		RR42_RS14530	0.23	-1.5
3,127,645	-		RR42_RS14530	0.23	-0.3
3,127,765	+		RR42_RS14530	0.54	-1.1
3,127,766	-		RR42_RS14530	0.54	-0.6
3,127,858	-		RR42_RS14530	0.77	+0.1
3,127,858	-		RR42_RS14530	0.77	-1.1
3,127,977	+				+0.2
3,127,977	+				+0.7
3,128,019	-				-0.2
3,128,055	+				-0.3
3,128,059	-				-0.4
3,128,061	+				-0.9
3,128,062	-				-0.6
3,128,062	-				+0.4
3,128,062	-				+1.4
3,128,192	+				+0.2
3,128,193	-				-1.2
3,128,346	-				-0.0
3,128,424	+				+0.4
3,128,424	+				+0.4
3,128,523	-		RR42_RS14535	0.10	-0.6
3,128,687	+		RR42_RS14535	0.25	+0.0
3,128,697	+		RR42_RS14535	0.25	-0.1
3,128,753	+		RR42_RS14535	0.30	+0.3
3,128,757	+		RR42_RS14535	0.31	-0.9
3,128,757	+		RR42_RS14535	0.31	+0.6
3,128,758	-		RR42_RS14535	0.31	+0.1
3,128,758	-		RR42_RS14535	0.31	-0.5
3,128,812	-		RR42_RS14535	0.35	-0.3
3,128,823	+		RR42_RS14535	0.36	+0.4
3,128,824	-		RR42_RS14535	0.36	-0.4
3,128,826	-		RR42_RS14535	0.37	-1.3