Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13265

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
2,856,146	-		RR42_RS13260	0.39	+1.7
2,856,146	-		RR42_RS13260	0.39	-0.2
2,856,236	-		RR42_RS13260	0.46	-1.9
2,856,278	-		RR42_RS13260	0.50	-0.4
2,856,431	-		RR42_RS13260	0.62	-0.4
2,856,556	+		RR42_RS13260	0.73	-1.1
2,856,557	-		RR42_RS13260	0.73	+1.3
2,856,724	+		RR42_RS13260	0.87	-0.1
2,856,725	-		RR42_RS13260	0.87	-1.1
2,856,725	-		RR42_RS13260	0.87	-0.6
2,856,910	+				-1.9
2,856,911	-				-0.2
2,857,406	-		RR42_RS13265	0.36	-0.4
2,857,406	-		RR42_RS13265	0.36	+0.0
2,857,406	-		RR42_RS13265	0.36	-0.1
2,857,676	+		RR42_RS13265	0.66	-0.3
2,857,676	+		RR42_RS13265	0.66	-1.0
2,857,677	-		RR42_RS13265	0.66	+0.2
2,857,718	-		RR42_RS13265	0.70	-0.5
2,858,039	+				-0.2
2,858,040	-				-0.5
2,858,171	+		RR42_RS13270	0.22	+0.3
2,858,171	+		RR42_RS13270	0.22	-0.1
2,858,171	+		RR42_RS13270	0.22	-1.1
2,858,172	-		RR42_RS13270	0.22	+0.4
2,858,172	-		RR42_RS13270	0.22	-1.1
2,858,172	-		RR42_RS13270	0.22	-1.9
2,858,336	+		RR42_RS13270	0.48	-0.1
2,858,336	+		RR42_RS13270	0.48	-1.4
2,858,336	+		RR42_RS13270	0.48	-0.7
2,858,337	-		RR42_RS13270	0.49	-1.6
2,858,337	-		RR42_RS13270	0.49	-1.3
2,858,349	-		RR42_RS13270	0.51	-0.2
2,858,464	-		RR42_RS13270	0.69	-0.4
2,858,464	-		RR42_RS13270	0.69	-1.2
2,858,558	+		RR42_RS13270	0.85	-0.1
2,858,559	-		RR42_RS13270	0.85	-0.9
2,858,559	-		RR42_RS13270	0.85	-0.1
2,858,559	-		RR42_RS13270	0.85	-0.5
2,858,559	-		RR42_RS13270	0.85	-1.1
2,858,719	+		RR42_RS13275	0.22	+1.9
2,858,719	+		RR42_RS13275	0.22	-0.7
2,858,720	-		RR42_RS13275	0.22	-0.8
2,858,753	-		RR42_RS13275	0.33	-0.3
2,858,819	-		RR42_RS13275	0.53	-1.1
2,858,819	-		RR42_RS13275	0.53	-1.2
2,858,885	+		RR42_RS13275	0.74	-0.7
2,858,886	-		RR42_RS13275	0.75	-1.5
2,858,886	-		RR42_RS13275	0.75	-1.1