Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13020

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
2,801,444	+				+0.3
2,801,529	-		RR42_RS13015	0.12	+0.7
2,801,532	-		RR42_RS13015	0.12	-0.1
2,801,532	-		RR42_RS13015	0.12	-0.1
2,801,591	+		RR42_RS13015	0.18	-1.0
2,801,771	+		RR42_RS13015	0.37	+0.1
2,801,921	+		RR42_RS13015	0.52	-0.5
2,801,925	+		RR42_RS13015	0.53	-1.4
2,801,925	+		RR42_RS13015	0.53	+0.2
2,801,926	-		RR42_RS13015	0.53	-0.5
2,801,942	+		RR42_RS13015	0.54	+0.4
2,801,976	-		RR42_RS13015	0.58	-1.9
2,802,144	-		RR42_RS13015	0.75	-1.5
2,803,043	+		RR42_RS13020	0.74	-0.8
2,803,044	-		RR42_RS13020	0.74	+0.1
2,803,044	-		RR42_RS13020	0.74	-1.2
2,803,112	-		RR42_RS13020	0.82	-1.7
2,803,112	-		RR42_RS13020	0.82	-0.2
2,803,319	+				-0.3
2,803,319	+				-0.8
2,803,319	+				-0.8
2,803,319	+				+0.6
2,803,319	+				-0.7
2,803,320	-				-0.3
2,803,320	-				-0.0
2,803,725	+		RR42_RS13025	0.36	-0.2
2,803,755	+		RR42_RS13025	0.39	-1.0
2,803,756	-		RR42_RS13025	0.39	-1.1
2,803,906	+		RR42_RS13025	0.55	-0.4
2,803,906	+		RR42_RS13025	0.55	-0.4
2,803,972	-		RR42_RS13025	0.61	-0.1
2,803,972	-		RR42_RS13025	0.61	+0.3
2,803,972	-		RR42_RS13025	0.61	+0.6
2,804,044	-		RR42_RS13025	0.69	-0.1