Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11990

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
2,567,785	+		RR42_RS11985	0.44	-0.5
2,567,785	+		RR42_RS11985	0.44	-1.5
2,567,785	+		RR42_RS11985	0.44	-0.7
2,567,786	-		RR42_RS11985	0.44	-0.7
2,567,799	-		RR42_RS11985	0.45	-0.2
2,568,318	+				+0.6
2,568,460	-				+0.7
2,568,511	-				-0.0
2,568,540	+				-0.0
2,568,540	+				+0.2
2,568,540	+				-0.8
2,568,541	-				-0.8
2,568,541	-				-0.2
2,568,609	+				-0.2
2,568,641	-		RR42_RS11990	0.12	-0.3
2,568,685	-		RR42_RS11990	0.15	-0.1
2,568,685	-		RR42_RS11990	0.15	-1.1
2,568,780	-		RR42_RS11990	0.21	+0.7
2,568,780	-		RR42_RS11990	0.21	-0.7
2,568,780	-		RR42_RS11990	0.21	+0.5
2,568,783	+		RR42_RS11990	0.21	+0.6
2,568,783	+		RR42_RS11990	0.21	-0.1
2,568,783	+		RR42_RS11990	0.21	-0.6
2,568,783	+		RR42_RS11990	0.21	+0.0
2,568,784	-		RR42_RS11990	0.21	+0.7
2,568,784	-		RR42_RS11990	0.21	+0.2
2,568,784	-		RR42_RS11990	0.21	-0.8
2,568,786	+		RR42_RS11990	0.21	+0.8
2,568,787	-		RR42_RS11990	0.21	-1.3
2,568,787	-		RR42_RS11990	0.21	+0.6
2,568,854	+		RR42_RS11990	0.26	+0.5
2,568,940	-		RR42_RS11990	0.31	-3.0
2,569,018	-		RR42_RS11990	0.36	+0.7
2,569,018	-		RR42_RS11990	0.36	-1.8
2,569,018	-		RR42_RS11990	0.36	-0.2
2,569,131	+		RR42_RS11990	0.43	-1.0
2,569,131	+		RR42_RS11990	0.43	-0.4
2,569,132	-		RR42_RS11990	0.44	+0.1
2,569,482	+		RR42_RS11990	0.66	-0.4
2,569,740	+		RR42_RS11990	0.83	-2.5
2,569,740	+		RR42_RS11990	0.83	+0.0
2,569,741	-		RR42_RS11990	0.83	+1.2
2,569,767	+		RR42_RS11990	0.85	-1.2
2,569,767	+		RR42_RS11990	0.85	-0.3
2,569,768	-		RR42_RS11990	0.85	+0.2
2,569,899	+				-1.1
2,569,900	-				-0.3
2,570,291	+		RR42_RS11995	0.14	+0.2
2,570,291	+		RR42_RS11995	0.14	-2.1
2,570,291	+		RR42_RS11995	0.14	+0.9
2,570,292	-		RR42_RS11995	0.14	-0.5
2,570,334	+		RR42_RS11995	0.16	-1.0
2,570,335	-		RR42_RS11995	0.16	+0.5
2,570,862	-		RR42_RS11995	0.44	-0.3