Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11625

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
2,488,292	+				-0.0
2,488,292	+				+0.1
2,488,292	+				+0.4
2,488,293	-				-0.1
2,488,510	+		RR42_RS11620	0.20	+0.0
2,488,729	+		RR42_RS11620	0.49	-0.4
2,488,760	+		RR42_RS11620	0.53	+0.4
2,488,761	-		RR42_RS11620	0.54	+0.6
2,488,761	-		RR42_RS11620	0.54	+0.3
2,489,011	+		RR42_RS11620	0.87	-1.3
2,489,011	+		RR42_RS11620	0.87	-0.1
2,489,012	-		RR42_RS11620	0.87	+0.2
2,489,092	-				-0.8
2,489,117	-				+0.6
2,489,245	-				-0.3
2,489,250	+				+0.6
2,489,265	+				-1.3
2,489,266	-				-0.0
2,489,358	-				-0.1
2,489,669	+		RR42_RS11625	0.30	-1.5
2,489,669	+		RR42_RS11625	0.30	+0.5
2,489,670	-		RR42_RS11625	0.30	+1.9
2,489,796	+		RR42_RS11625	0.39	+0.1
2,489,796	+		RR42_RS11625	0.39	-0.3
2,489,797	-		RR42_RS11625	0.39	-0.1
2,489,797	-		RR42_RS11625	0.39	+0.5
2,489,837	+		RR42_RS11625	0.42	-0.1
2,489,837	+		RR42_RS11625	0.42	+1.5
2,489,838	-		RR42_RS11625	0.43	+0.7
2,489,838	-		RR42_RS11625	0.43	-1.8
2,489,856	-		RR42_RS11625	0.44	-0.1
2,490,031	-		RR42_RS11625	0.57	-0.1
2,490,031	-		RR42_RS11625	0.57	-0.1
2,490,074	+		RR42_RS11625	0.60	+0.9
2,490,074	+		RR42_RS11625	0.60	+0.5
2,490,075	-		RR42_RS11625	0.60	-0.8
2,490,076	-		RR42_RS11625	0.60	+0.7
2,490,270	+		RR42_RS11625	0.75	+0.5
2,490,271	-		RR42_RS11625	0.75	+0.4
2,490,271	-		RR42_RS11625	0.75	-0.3
2,490,370	-		RR42_RS11625	0.82	+0.1
2,490,540	+				+0.2
2,490,540	+				+0.1
2,490,541	-				-0.0
2,490,561	-				+0.9
2,490,658	+				+0.1
2,490,659	-				+0.5
2,490,680	+				+0.0
2,490,681	-				-0.4
2,490,681	-				+0.7
2,490,718	+				-0.8
2,490,740	+				-0.5
2,490,790	+				-0.5
2,490,791	-				+1.7
2,490,791	-				+0.0
2,490,887	-				-1.3
2,491,102	+		RR42_RS11630	0.14	+0.2
2,491,139	+		RR42_RS11630	0.15	+0.7
2,491,139	+		RR42_RS11630	0.15	-0.5
2,491,139	+		RR42_RS11630	0.15	-0.1
2,491,140	-		RR42_RS11630	0.15	+0.3
2,491,140	-		RR42_RS11630	0.15	+1.4
2,491,141	+		RR42_RS11630	0.15	-0.4
2,491,142	-		RR42_RS11630	0.15	+0.3
2,491,305	+		RR42_RS11630	0.22	-2.8
2,491,316	+		RR42_RS11630	0.22	-0.1
2,491,316	+		RR42_RS11630	0.22	-0.7
2,491,316	+		RR42_RS11630	0.22	-0.1
2,491,317	-		RR42_RS11630	0.22	+0.7
2,491,351	+		RR42_RS11630	0.23	+0.1
2,491,352	-		RR42_RS11630	0.23	+0.3
2,491,352	-		RR42_RS11630	0.23	-0.5
2,491,377	-		RR42_RS11630	0.24	+0.1