Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10900

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
2,330,596	+		RR42_RS10890	0.31	-1.0
2,330,596	+		RR42_RS10890	0.31	-0.2
2,330,596	+		RR42_RS10890	0.31	-0.8
2,330,596	+		RR42_RS10890	0.31	+0.0
2,330,596	+		RR42_RS10890	0.31	-0.2
2,330,597	-		RR42_RS10890	0.31	+0.2
2,330,597	-		RR42_RS10890	0.31	-0.4
2,330,643	+		RR42_RS10890	0.40	-0.8
2,330,643	+		RR42_RS10890	0.40	-0.3
2,330,643	+		RR42_RS10890	0.40	-0.7
2,330,643	+		RR42_RS10890	0.40	+0.9
2,330,643	+		RR42_RS10890	0.40	-0.6
2,330,644	-		RR42_RS10890	0.40	-1.4
2,330,682	+		RR42_RS10890	0.47	-0.4
2,330,682	+		RR42_RS10890	0.47	-0.1
2,330,889	+		RR42_RS10890	0.87	+0.2
2,330,889	+		RR42_RS10890	0.87	-0.6
2,330,890	-		RR42_RS10890	0.87	+0.1
2,330,890	-		RR42_RS10890	0.87	-0.3
2,330,890	-		RR42_RS10890	0.87	-0.3
2,330,890	-		RR42_RS10890	0.87	-0.4
2,330,938	+				+0.4
2,331,014	-				-0.5
2,331,017	+				-0.5
2,331,017	+				-0.2
2,331,018	-				-0.4
2,331,018	-				-0.0
2,331,208	+		RR42_RS10895	0.44	+0.8
2,331,208	+		RR42_RS10895	0.44	-1.3
2,331,209	-		RR42_RS10895	0.44	+0.7
2,331,316	+		RR42_RS10895	0.72	+0.4
2,331,316	+		RR42_RS10895	0.72	+0.7
2,331,316	+		RR42_RS10895	0.72	+0.5
2,331,316	+		RR42_RS10895	0.72	-0.8
2,331,317	-		RR42_RS10895	0.72	-0.6
2,331,317	-		RR42_RS10895	0.72	+0.3
2,331,317	-		RR42_RS10895	0.72	-0.7
2,331,317	-		RR42_RS10895	0.72	-1.7
2,331,325	+		RR42_RS10895	0.74	+0.7
2,331,326	-		RR42_RS10895	0.75	-1.7
2,331,326	-		RR42_RS10895	0.75	+0.5
2,331,470	+				-1.5
2,331,470	+				+0.2
2,331,470	+				+0.2
2,331,470	+				-0.5
2,331,471	-				+0.3
2,331,471	-				-0.2
2,331,471	-				-0.7
2,331,492	-				-0.2
2,331,492	-				-0.5
2,331,492	-				-0.1
2,331,542	+				+0.4
2,331,542	+				-0.3
2,331,543	-				-1.1
2,332,542	-				-1.5
2,332,564	-				-2.9
2,332,564	-				+0.2
2,332,582	-				-0.5
2,332,586	-				+0.3
2,332,586	-				-0.5
2,332,586	-				+0.7
2,332,586	-				-1.0
2,332,635	-				-0.8
2,333,297	-				+0.3
2,333,297	-				-3.6
2,333,387	-				-0.2
2,333,484	-		RR42_RS10910	0.19	+0.7
2,333,484	-		RR42_RS10910	0.19	-0.1
2,333,484	-		RR42_RS10910	0.19	-0.3
2,333,484	-		RR42_RS10910	0.19	-0.3
2,333,484	-		RR42_RS10910	0.19	-0.5
2,333,488	+		RR42_RS10910	0.19	+0.0
2,333,488	+		RR42_RS10910	0.19	-1.1
2,333,488	+		RR42_RS10910	0.19	+0.4
2,333,489	-		RR42_RS10910	0.19	-0.6
2,333,489	-		RR42_RS10910	0.19	+0.0
2,333,489	-		RR42_RS10910	0.19	-0.8
2,333,489	-		RR42_RS10910	0.19	-0.6