Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07525

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
1,607,740	+		RR42_RS07520	0.52	-0.3
1,607,740	+		RR42_RS07520	0.52	-0.5
1,607,740	+		RR42_RS07520	0.52	-0.2
1,607,740	+		RR42_RS07520	0.52	+0.0
1,607,741	-		RR42_RS07520	0.52	-0.3
1,607,741	-		RR42_RS07520	0.52	-0.5
1,607,741	-		RR42_RS07520	0.52	-0.0
1,607,741	-		RR42_RS07520	0.52	+0.0
1,607,741	-		RR42_RS07520	0.52	-0.2
1,607,741	-		RR42_RS07520	0.52	+0.8
1,607,743	-		RR42_RS07520	0.52	+0.3
1,607,743	-		RR42_RS07520	0.52	-0.3
1,607,743	-		RR42_RS07520	0.52	-0.4
1,608,063	+		RR42_RS07520	0.71	-1.0
1,608,129	+		RR42_RS07520	0.75	+0.2
1,608,129	+		RR42_RS07520	0.75	-0.5
1,608,129	+		RR42_RS07520	0.75	-0.1
1,608,129	+		RR42_RS07520	0.75	-0.6
1,608,129	+		RR42_RS07520	0.75	+2.0
1,608,130	-		RR42_RS07520	0.75	-1.1
1,608,130	-		RR42_RS07520	0.75	+1.1
1,608,150	+		RR42_RS07520	0.76	-0.8
1,608,160	-		RR42_RS07520	0.77	+0.2
1,608,160	-		RR42_RS07520	0.77	+0.7
1,608,179	+		RR42_RS07520	0.78	+0.3
1,608,180	-		RR42_RS07520	0.78	+0.2
1,608,180	-		RR42_RS07520	0.78	+0.0
1,608,180	-		RR42_RS07520	0.78	-0.2
1,608,201	+		RR42_RS07520	0.79	-0.2
1,608,201	+		RR42_RS07520	0.79	-0.4
1,608,201	+		RR42_RS07520	0.79	-0.7
1,608,201	+		RR42_RS07520	0.79	-0.1
1,608,201	+		RR42_RS07520	0.79	+0.4
1,608,201	+		RR42_RS07520	0.79	-0.4
1,608,202	-		RR42_RS07520	0.79	-0.2
1,608,202	-		RR42_RS07520	0.79	+1.3
1,608,202	-		RR42_RS07520	0.79	+1.2
1,608,202	-		RR42_RS07520	0.79	-1.9
1,608,202	-		RR42_RS07520	0.79	+1.0
1,608,202	-		RR42_RS07520	0.79	-0.6
1,608,202	-		RR42_RS07520	0.79	+0.2
1,608,202	-		RR42_RS07520	0.79	+0.4
1,608,205	+		RR42_RS07520	0.79	-1.5
1,608,205	+		RR42_RS07520	0.79	-0.5
1,608,205	+		RR42_RS07520	0.79	+0.8
1,608,205	+		RR42_RS07520	0.79	-1.2
1,608,206	-		RR42_RS07520	0.79	+0.1
1,608,206	-		RR42_RS07520	0.79	+0.0
1,608,395	+				-0.4
1,608,395	+				+0.0
1,608,395	+				-0.0
1,608,395	+				-0.7
1,608,396	-				+0.8
1,608,396	-				+0.6
1,608,396	-				-0.7
1,608,396	-				-0.5
1,608,396	-				-0.6
1,608,396	-				+0.5
1,608,399	+				+0.6
1,608,610	+				+0.8
1,608,618	+				+0.5
1,608,618	+				-0.1
1,608,619	-				+0.5
1,608,619	-				+0.7
1,608,710	+		RR42_RS07525	0.19	-0.6
1,608,710	+		RR42_RS07525	0.19	-0.7
1,608,770	+		RR42_RS07525	0.26	-0.2
1,608,770	+		RR42_RS07525	0.26	+0.1
1,609,126	+		RR42_RS07525	0.69	-0.4
1,609,127	-		RR42_RS07525	0.69	+0.3
1,609,282	+		RR42_RS07525	0.88	-0.6
1,609,357	-				-0.9
1,609,367	-				-0.5
1,609,569	+				+0.3
1,609,652	+		RR42_RS07530	0.10	+0.4
1,609,653	-		RR42_RS07530	0.10	-0.8
1,609,664	+		RR42_RS07530	0.11	-0.7
1,609,664	+		RR42_RS07530	0.11	+0.4
1,609,665	-		RR42_RS07530	0.12	+0.5
1,609,665	-		RR42_RS07530	0.12	+0.3
1,609,665	-		RR42_RS07530	0.12	+0.2
1,609,665	-		RR42_RS07530	0.12	-0.2
1,609,665	-		RR42_RS07530	0.12	-1.2
1,609,706	+		RR42_RS07530	0.15	-0.1
1,609,706	+		RR42_RS07530	0.15	-2.2
1,609,707	-		RR42_RS07530	0.15	+0.3
1,609,752	-		RR42_RS07530	0.19	-1.0
1,609,961	-		RR42_RS07530	0.37	+0.8
1,609,961	-		RR42_RS07530	0.37	+0.5
1,610,061	-		RR42_RS07530	0.45	-0.8
1,610,061	-		RR42_RS07530	0.45	-1.6
1,610,291	+		RR42_RS07530	0.64	-2.2
1,610,292	-		RR42_RS07530	0.65	-0.6
1,610,292	-		RR42_RS07530	0.65	-1.2
1,610,369	+		RR42_RS07530	0.71	-0.0