Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05305

Experiment: R2A with Cephalothin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cephalothin 0.25 mg/ml
1,171,767	+		RR42_RS05300	0.74	-0.6
1,171,768	-				-0.6
1,171,846	+		RR42_RS05300	0.78	+1.0
1,171,846	+		RR42_RS05300	0.78	+0.2
1,171,846	+		RR42_RS05300	0.78	-1.0
1,171,847	-		RR42_RS05300	0.78	+1.0
1,171,958	-		RR42_RS05300	0.83	-0.0
1,172,011	+		RR42_RS05300	0.85	+1.0
1,172,011	+		RR42_RS05300	0.85	-1.7
1,172,043	+		RR42_RS05300	0.86	+0.4
1,172,044	-		RR42_RS05300	0.86	-0.1
1,172,458	+				-2.6
1,172,458	+				-0.5
1,172,458	+				+0.6
1,172,462	+				-0.9
1,172,462	+				-2.5
1,172,462	+				-0.2
1,172,462	+				-0.2
1,172,463	-				-0.2
1,172,463	-				+0.3
1,172,463	-				-0.4
1,172,463	-				-0.6
1,172,463	-				-0.7
1,172,467	+				-0.5
1,172,468	-				-0.8
1,172,967	+		RR42_RS05305	0.42	-0.6
1,172,967	+		RR42_RS05305	0.42	-1.3
1,172,968	-		RR42_RS05305	0.42	+0.2
1,172,968	-		RR42_RS05305	0.42	-1.2
1,172,997	+		RR42_RS05305	0.46	-0.1
1,173,115	-		RR42_RS05305	0.61	-1.2
1,173,588	+		RR42_RS05310	0.18	-0.5
1,173,589	-		RR42_RS05310	0.18	+0.7
1,173,732	+		RR42_RS05310	0.51	-1.0
1,173,822	-		RR42_RS05310	0.72	-0.0
1,174,029	+				-0.3
1,174,030	-				-0.9
1,174,086	+				+1.0
1,174,094	+				+0.1
1,174,095	-				-0.3
1,174,095	-				+0.7
1,174,232	+				-1.8
1,174,233	-				+0.3
1,174,233	-				+0.3