Experiment: R2A with Cephalothin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS03365 and RR42_RS03370 are separated by 39 nucleotides RR42_RS03370 and RR42_RS03375 are separated by 83 nucleotides
RR42_RS03365: RR42_RS03365 - fructose ABC transporter, permease component (FrcC) <small>(from data)</small>, at 748,354 to 749,355
_RS03365
RR42_RS03370: RR42_RS03370 - fructose ABC transporter, substrate-binding component (FrcB) <small>(from data)</small>, at 749,395 to 750,372
_RS03370
RR42_RS03375: RR42_RS03375 - glucose-6-phosphate dehydrogenase, at 750,456 to 751,946
_RS03375
Position (kb) 749
750
751 Strain fitness (log2 ratio) -1
0
1
2
3 at 748.467 kb on - strand, within RR42_RS03365 at 748.875 kb on - strand, within RR42_RS03365 at 748.967 kb on - strand, within RR42_RS03365 at 749.038 kb on + strand, within RR42_RS03365 at 749.039 kb on - strand, within RR42_RS03365 at 749.095 kb on + strand, within RR42_RS03365 at 749.129 kb on - strand, within RR42_RS03365 at 749.278 kb on + strand at 749.278 kb on + strand at 749.278 kb on + strand at 749.554 kb on + strand, within RR42_RS03370 at 749.671 kb on - strand, within RR42_RS03370 at 750.040 kb on + strand, within RR42_RS03370 at 750.346 kb on + strand at 750.473 kb on - strand at 750.527 kb on + strand at 750.633 kb on + strand, within RR42_RS03375 at 750.634 kb on - strand, within RR42_RS03375 at 750.634 kb on - strand, within RR42_RS03375 at 750.634 kb on - strand, within RR42_RS03375 at 750.724 kb on - strand, within RR42_RS03375 at 750.724 kb on - strand, within RR42_RS03375 at 750.810 kb on + strand, within RR42_RS03375 at 750.810 kb on + strand, within RR42_RS03375 at 750.981 kb on + strand, within RR42_RS03375 at 750.996 kb on + strand, within RR42_RS03375 at 750.997 kb on - strand, within RR42_RS03375 at 751.048 kb on + strand, within RR42_RS03375 at 751.049 kb on - strand, within RR42_RS03375 at 751.049 kb on - strand, within RR42_RS03375 at 751.049 kb on - strand, within RR42_RS03375 at 751.049 kb on - strand, within RR42_RS03375 at 751.141 kb on - strand, within RR42_RS03375 at 751.327 kb on - strand, within RR42_RS03375 at 751.327 kb on - strand, within RR42_RS03375 at 751.366 kb on - strand, within RR42_RS03375
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Cephalothin 0.25 mg/ml remove 748,467 - RR42_RS03365 0.11 -0.1 748,875 - RR42_RS03365 0.52 -0.3 748,967 - RR42_RS03365 0.61 +1.2 749,038 + RR42_RS03365 0.68 -0.8 749,039 - RR42_RS03365 0.68 -1.1 749,095 + RR42_RS03365 0.74 -1.2 749,129 - RR42_RS03365 0.77 +0.8 749,278 + -1.0 749,278 + -0.4 749,278 + -0.8 749,554 + RR42_RS03370 0.16 -1.2 749,671 - RR42_RS03370 0.28 -1.3 750,040 + RR42_RS03370 0.66 -0.0 750,346 + +0.4 750,473 - +2.9 750,527 + +0.1 750,633 + RR42_RS03375 0.12 -0.1 750,634 - RR42_RS03375 0.12 +0.8 750,634 - RR42_RS03375 0.12 +1.1 750,634 - RR42_RS03375 0.12 -0.6 750,724 - RR42_RS03375 0.18 +1.6 750,724 - RR42_RS03375 0.18 +0.4 750,810 + RR42_RS03375 0.24 -1.6 750,810 + RR42_RS03375 0.24 -0.7 750,981 + RR42_RS03375 0.35 -0.2 750,996 + RR42_RS03375 0.36 -0.3 750,997 - RR42_RS03375 0.36 +0.8 751,048 + RR42_RS03375 0.40 +0.5 751,049 - RR42_RS03375 0.40 +0.7 751,049 - RR42_RS03375 0.40 +2.2 751,049 - RR42_RS03375 0.40 +0.5 751,049 - RR42_RS03375 0.40 -1.6 751,141 - RR42_RS03375 0.46 +0.7 751,327 - RR42_RS03375 0.58 +0.9 751,327 - RR42_RS03375 0.58 +1.2 751,366 - RR42_RS03375 0.61 -1.0
Or see this region's nucleotide sequence