Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1240

Experiment: Uridine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine (N)
1,417,382	+		Pf1N1B4_1239	0.37	-0.8
1,417,382	+		Pf1N1B4_1239	0.37	-0.8
1,417,382	+		Pf1N1B4_1239	0.37	-3.0
1,417,382	+		Pf1N1B4_1239	0.37	-1.4
1,417,382	+		Pf1N1B4_1239	0.37	-0.8
1,417,382	+		Pf1N1B4_1239	0.37	-0.8
1,417,383	-		Pf1N1B4_1239	0.37	+1.2
1,417,383	-		Pf1N1B4_1239	0.37	+0.2
1,417,383	-		Pf1N1B4_1239	0.37	-2.4
1,417,383	-		Pf1N1B4_1239	0.37	+0.2
1,417,383	-		Pf1N1B4_1239	0.37	-1.8
1,417,383	-		Pf1N1B4_1239	0.37	-1.4
1,417,383	-		Pf1N1B4_1239	0.37	-1.8
1,417,383	-		Pf1N1B4_1239	0.37	+0.2
1,417,511	-		Pf1N1B4_1239	0.46	-2.2
1,417,511	-		Pf1N1B4_1239	0.46	-1.8
1,417,835	-		Pf1N1B4_1239	0.70	+0.2
1,417,835	-		Pf1N1B4_1239	0.70	+0.7
1,417,982	-		Pf1N1B4_1239	0.81	-2.2
1,417,982	-		Pf1N1B4_1239	0.81	-0.8
1,418,074	+		Pf1N1B4_1239	0.88	+1.2
1,418,075	-		Pf1N1B4_1239	0.88	-0.4
1,418,165	-				-2.2
1,418,165	-				-2.4
1,418,165	-				-0.8
1,418,256	+				-1.4
1,418,290	+				-1.4
1,418,306	+				-0.8
1,418,306	+				+0.2
1,418,306	+				-2.8
1,418,608	+		Pf1N1B4_1240	0.25	-1.4
1,418,609	-		Pf1N1B4_1240	0.26	-0.8
1,418,627	+		Pf1N1B4_1240	0.27	+0.2
1,418,627	+		Pf1N1B4_1240	0.27	+0.7
1,418,628	-		Pf1N1B4_1240	0.28	+0.6
1,418,628	-		Pf1N1B4_1240	0.28	+0.2
1,418,628	-		Pf1N1B4_1240	0.28	+0.2
1,418,628	-		Pf1N1B4_1240	0.28	-0.8
1,418,628	-		Pf1N1B4_1240	0.28	-2.2
1,418,630	+		Pf1N1B4_1240	0.28	-0.3
1,418,630	+		Pf1N1B4_1240	0.28	-3.0
1,418,630	+		Pf1N1B4_1240	0.28	-0.8
1,418,630	+		Pf1N1B4_1240	0.28	+2.5
1,418,631	-		Pf1N1B4_1240	0.28	+0.2
1,418,631	-		Pf1N1B4_1240	0.28	-1.6
1,418,784	-		Pf1N1B4_1240	0.45	-2.2
1,418,784	-		Pf1N1B4_1240	0.45	-0.8
1,418,784	-		Pf1N1B4_1240	0.45	+2.2
1,418,894	-		Pf1N1B4_1240	0.56	+0.2
1,418,905	+		Pf1N1B4_1240	0.58	+0.2
1,418,905	+		Pf1N1B4_1240	0.58	-0.8
1,418,926	+		Pf1N1B4_1240	0.60	-2.4
1,418,926	+		Pf1N1B4_1240	0.60	+0.2
1,418,927	-		Pf1N1B4_1240	0.60	-1.4
1,418,927	-				+0.2
1,418,927	-		Pf1N1B4_1240	0.60	-2.2
1,418,927	-		Pf1N1B4_1240	0.60	-1.8
1,418,953	+		Pf1N1B4_1240	0.63	-1.4
1,418,953	+		Pf1N1B4_1240	0.63	+2.2
1,418,953	+		Pf1N1B4_1240	0.63	+0.2
1,418,953	+		Pf1N1B4_1240	0.63	+0.2
1,418,953	+		Pf1N1B4_1240	0.63	-1.4
1,418,954	-		Pf1N1B4_1240	0.63	-1.4
1,418,954	-		Pf1N1B4_1240	0.63	+0.2
1,418,954	-		Pf1N1B4_1240	0.63	-0.8
1,418,957	+		Pf1N1B4_1240	0.63	-1.8
1,418,957	+				-0.8
1,418,957	+		Pf1N1B4_1240	0.63	+0.2
1,418,958	-		Pf1N1B4_1240	0.63	-2.2
1,418,958	-		Pf1N1B4_1240	0.63	-1.4
1,418,958	-		Pf1N1B4_1240	0.63	+0.2
1,418,958	-				-0.8
1,418,958	-		Pf1N1B4_1240	0.63	-3.4
1,419,046	+		Pf1N1B4_1240	0.73	-2.8
1,419,047	-				+1.2
1,419,118	+		Pf1N1B4_1240	0.81	-1.4
1,419,118	+		Pf1N1B4_1240	0.81	-0.8
1,419,118	+		Pf1N1B4_1240	0.81	-1.8
1,419,127	+		Pf1N1B4_1240	0.82	-2.2
1,419,142	+		Pf1N1B4_1240	0.83	+0.2
1,419,202	+		Pf1N1B4_1240	0.90	+0.2
1,419,203	-				-1.4
1,419,462	-				+0.2
1,419,477	+				+0.6
1,419,487	+				+1.7
1,419,488	-				+2.5
1,419,505	+				-0.8
1,419,505	+				-1.8
1,419,505	+				-0.8
1,419,506	-				-0.8
1,419,677	+		Pf1N1B4_1241	0.26	-2.2
1,419,678	-		Pf1N1B4_1241	0.26	+1.6
1,419,678	-				+0.2
1,419,678	-		Pf1N1B4_1241	0.26	+0.2
1,419,678	-		Pf1N1B4_1241	0.26	+0.2
1,419,680	+		Pf1N1B4_1241	0.27	+1.2
1,419,680	+		Pf1N1B4_1241	0.27	-0.4
1,419,680	+		Pf1N1B4_1241	0.27	-0.8
1,419,680	+		Pf1N1B4_1241	0.27	-1.8
1,419,681	-		Pf1N1B4_1241	0.27	+0.4
1,419,681	-				+3.2
1,419,681	-		Pf1N1B4_1241	0.27	+1.2
1,419,681	-		Pf1N1B4_1241	0.27	-1.8
1,419,681	-		Pf1N1B4_1241	0.27	-0.4
1,419,681	-		Pf1N1B4_1241	0.27	+0.2
1,419,704	+		Pf1N1B4_1241	0.30	+0.9
1,419,704	+		Pf1N1B4_1241	0.30	+0.6
1,419,704	+		Pf1N1B4_1241	0.30	+0.2
1,419,704	+		Pf1N1B4_1241	0.30	+0.2
1,419,704	+		Pf1N1B4_1241	0.30	+1.7
1,419,704	+		Pf1N1B4_1241	0.30	+0.7
1,419,704	+		Pf1N1B4_1241	0.30	+1.5
1,419,705	-		Pf1N1B4_1241	0.31	-0.8
1,419,705	-		Pf1N1B4_1241	0.31	+0.2
1,419,705	-		Pf1N1B4_1241	0.31	+1.9
1,419,705	-		Pf1N1B4_1241	0.31	+1.2
1,419,705	-		Pf1N1B4_1241	0.31	+0.7
1,419,705	-				+0.2
1,419,745	+		Pf1N1B4_1241	0.37	+0.2
1,419,745	+				-1.4
1,419,746	-		Pf1N1B4_1241	0.37	+1.2
1,419,746	-		Pf1N1B4_1241	0.37	-0.5
1,419,746	-		Pf1N1B4_1241	0.37	+1.2
1,419,746	-		Pf1N1B4_1241	0.37	+1.2
1,419,746	-		Pf1N1B4_1241	0.37	-0.4
1,419,746	-		Pf1N1B4_1241	0.37	+1.7
1,419,797	+		Pf1N1B4_1241	0.45	-0.4
1,419,798	-		Pf1N1B4_1241	0.45	+2.2
1,420,025	+		Pf1N1B4_1241	0.80	-1.6
1,420,120	+				+0.2
1,420,121	-				+1.2
1,420,150	+				+0.9
1,420,151	-				-0.2
1,420,151	-				-1.4
1,420,154	+				+0.8
1,420,154	+				+0.9
1,420,154	+				+0.2
1,420,154	+				+0.2
1,420,154	+				-2.2
1,420,154	+				+0.5
1,420,154	+				+0.2
1,420,154	+				+0.2
1,420,154	+				-0.3
1,420,155	-				+0.9
1,420,155	-				+0.2
1,420,155	-				+0.2
1,420,155	-				+0.2
1,420,155	-				+1.5
1,420,155	-				+1.0
1,420,155	-				-0.4
1,420,155	-				-0.2
1,420,163	+				-0.4
1,420,163	+				-0.8
1,420,163	+				-1.4
1,420,163	+				-0.0
1,420,163	+				+1.1
1,420,163	+				+1.2
1,420,164	-				+0.2
1,420,164	-				+1.7
1,420,164	-				-0.8
1,420,164	-				+2.7
1,420,164	-				+0.2
1,420,164	-				+1.3
1,420,164	-				+0.2
1,420,164	-				+1.2
1,420,173	-				-0.4