Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3492 and Dsui_3493 are separated by 278 nucleotides Dsui_3493 and Dsui_3494 are separated by 1 nucleotides
Dsui_3492: Dsui_3492 - Tfp pilus assembly protein, tip-associated adhesin PilY1, at 3,755,518 to 3,759,021
_3492
Dsui_3493: Dsui_3493 - Gram-negative bacterial tonB protein, at 3,759,300 to 3,759,743
_3493
Dsui_3494: Dsui_3494 - (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase, at 3,759,745 to 3,760,674
_3494
Position (kb)
3759
3760 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3758.353 kb on - strand, within Dsui_3492 at 3758.422 kb on + strand, within Dsui_3492 at 3758.500 kb on - strand, within Dsui_3492 at 3758.512 kb on + strand, within Dsui_3492 at 3758.520 kb on - strand, within Dsui_3492 at 3758.578 kb on - strand, within Dsui_3492 at 3758.590 kb on - strand, within Dsui_3492 at 3758.590 kb on - strand, within Dsui_3492 at 3758.609 kb on + strand, within Dsui_3492 at 3758.624 kb on - strand, within Dsui_3492 at 3758.707 kb on - strand at 3758.762 kb on + strand at 3758.802 kb on - strand at 3758.888 kb on - strand at 3758.899 kb on + strand at 3759.085 kb on - strand at 3759.097 kb on + strand at 3759.128 kb on - strand at 3759.251 kb on - strand at 3759.263 kb on + strand at 3759.271 kb on - strand at 3759.271 kb on - strand at 3759.374 kb on - strand, within Dsui_3493 at 3759.445 kb on - strand, within Dsui_3493 at 3759.547 kb on + strand, within Dsui_3493 at 3759.547 kb on - strand, within Dsui_3493 at 3759.552 kb on - strand, within Dsui_3493 at 3759.565 kb on - strand, within Dsui_3493 at 3759.634 kb on - strand, within Dsui_3493 at 3759.675 kb on + strand, within Dsui_3493 at 3759.675 kb on + strand, within Dsui_3493
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 3,758,353 - Dsui_3492 0.81 -1.1 3,758,422 + Dsui_3492 0.83 -1.0 3,758,500 - Dsui_3492 0.85 -0.1 3,758,512 + Dsui_3492 0.85 -0.6 3,758,520 - Dsui_3492 0.86 +0.9 3,758,578 - Dsui_3492 0.87 +0.9 3,758,590 - Dsui_3492 0.88 -0.7 3,758,590 - Dsui_3492 0.88 -0.7 3,758,609 + Dsui_3492 0.88 -1.1 3,758,624 - Dsui_3492 0.89 -1.9 3,758,707 - -0.1 3,758,762 + -0.8 3,758,802 - -0.7 3,758,888 - -0.1 3,758,899 + -0.2 3,759,085 - -1.5 3,759,097 + +0.9 3,759,128 - -3.3 3,759,251 - -3.7 3,759,263 + -1.9 3,759,271 - -2.9 3,759,271 - -1.6 3,759,374 - Dsui_3493 0.17 -0.8 3,759,445 - Dsui_3493 0.33 -1.2 3,759,547 + Dsui_3493 0.56 -2.5 3,759,547 - Dsui_3493 0.56 -1.3 3,759,552 - Dsui_3493 0.57 -0.9 3,759,565 - Dsui_3493 0.60 -0.9 3,759,634 - Dsui_3493 0.75 -1.8 3,759,675 + Dsui_3493 0.84 -4.0 3,759,675 + Dsui_3493 0.84 -2.9
Or see this region's nucleotide sequence